RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ERICH1Q86X53 443 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 ZNF683Q8IZ20 524 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 ATP6V0D2Q8N8Y2 350 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 TMEM35BQ8NCS4 154 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 C18orf8Q96DM3 657 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 ALG14Q96F25 216 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 RPL10LQ96L21 214 aaKnown RBP12.93□□□□□ -0.34
SMPD4-204ENST00000430682 NOX5Q96PH1 765 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
SMPD4-204ENST00000430682 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 SYNCQ9H7C4 482 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 TMEM59LQ9UK28 342 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 VANGL2Q9ULK5 521 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 PLA2G4CQ9UP65 541 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 ERVW-1Q9UQF0 538 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 HS3ST4Q9Y661 456 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 USP24Q9UPU5 2620 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 LRRC10BA6NIK2 292 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 LGALS16A8MUM7 142 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 F5H5T6 163 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 H0Y626 953 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 GOLGA8SH3BPF8 625 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 SIN3BO75182 1162 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 CNTN5O94779 1100 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 CYP1A1P04798 512 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-204ENST00000430682 VAV1P15498 845 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 CCR1P32246 355 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 SOX5P35711 763 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 MAPK8P45983 427 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 TYRO3Q06418 890 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 PTP4A2Q12974 167 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 CDH18Q13634 790 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 N4BP2L1Q5TBK1 243 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-204ENST00000430682 IL31Q6EBC2 164 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 BNIPLQ7Z465 357 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 AOPEPQ8N6M6 819 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 EMC1Q8N766 993 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 SLC30A5Q8TAD4 765 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 PRCCQ92733 491 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-204ENST00000430682 MAGEB5Q9BZ81 275 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 PDCL3Q9H2J4 239 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 TMEM9BQ9NQ34 198 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMPD4-204ENST00000430682 SERGEFQ9UGK8 458 aa12.92□□□□□ -0.34
SMPD4-204ENST00000430682 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 TEX33O43247 280 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 NDUFS2O75306 463 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 KCNK5O95279 499 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 MBD3O95983 291 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 CFIP05156 583 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 ATP5BP06576 529 aaKnown RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 ADRB1P08588 477 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 KCNA4P22459 653 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 SULT1E1P49888 294 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 CDR2Q01850 454 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 BNC1Q01954 994 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 DUOXA1Q1HG43 343 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 HNRNPA1L2Q32P51 320 aaKnown RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 C5orf22Q49AR2 442 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 ANO6Q4KMQ2 910 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 ALFQ53S48 1182 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 C9orf64Q5T6V5 341 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 FAM102AQ5T9C2 384 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 DHX40Q8IX18 779 aaKnown RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 C1orf216Q8TAB5 229 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 RNF34Q969K3 372 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 ERGIC2Q96RQ1 377 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 FAM129BQ96TA1 746 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 TKTL2Q9H0I9 626 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 SIK2Q9H0K1 926 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 RSPH9Q9H1X1 276 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 C6orf106Q9H6K1 298 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 ARHGEF38Q9NXL2 777 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 KIAA1522Q9P206 1035 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-204ENST00000430682 SLC6A14Q9UN76 642 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 OR51B4Q9Y5P0 310 aa12.91□□□□□ -0.34
SMPD4-204ENST00000430682 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 DMXL2Q8TDJ6 3036 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 A0A1B0GVM2 712 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 TCAF2A6NFQ2 919 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 METTL12A8MUP2 240 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 GOLGA6L22H0YM25 854 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 LSM8O95777 96 aaKnown RBP12.9□□□□□ -0.34
SMPD4-204ENST00000430682 ASLP04424 464 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 SERPINF2P08697 491 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 SLC2A3P11169 496 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 UNGP13051 313 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-204ENST00000430682 ABCB4P21439 1286 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 SCNN1AP37088 669 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 METAP1P53582 386 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 UBXN1Q04323 297 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 UAP1L1Q3KQV9 507 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 DCAF12L1Q5VU92 463 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 ZDHHC17Q8IUH5 632 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 RGL4Q8IZJ4 473 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms