RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 IL21RQ9HBE5 538 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 PREBQ9HCU5 417 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RXFP3Q9NSD7 469 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ANKEF1Q9NU02 776 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ORC3Q9UBD5 711 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 CNTN6Q9UQ52 1028 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RCE1Q9Y256 329 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 A0A087X0M5 115 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 A0A1B0GX30 115 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 TCRBV5S1A1TA0A578 114 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 M0QYT0 321 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 SPTLC2O15270 562 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 GJB3O75712 270 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 DDX58O95786 925 aaKnown RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 CER1O95813 267 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 LATS1O95835 1130 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 BMP15O95972 392 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 VIPP01282 170 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 CSF1P09603 554 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 MMP8P22894 467 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 GGT5P36269 586 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 DRG2P55039 364 aaKnown RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 VAMP2P63027 116 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 MTAPQ13126 283 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 TDGQ13569 410 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 KCNJ12Q14500 433 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 KCNB1Q14721 858 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 SMAD1Q15797 465 aaKnown RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 EZH2Q15910 746 aaKnown RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZNF484Q5JVG2 852 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 C1QTNF12Q5T7M4 302 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ATG16L1Q676U5 607 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 NFRKBQ6P4R8 1299 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZNF782Q6ZMW2 699 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 SYNE3Q6ZMZ3 975 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 DCDC5Q6ZRR9 648 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 H1FNTQ75WM6 255 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ENOSF1Q7L5Y1 443 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 RAB11FIP2Q7L804 512 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 FAM71DQ8N9W8 422 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 LINS1Q8NG48 757 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 MAFAQ8NHW3 353 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 RFFLQ8WZ73 363 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 OVCA2Q8WZ82 227 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZBTB9Q96C00 473 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 EDC3Q96F86 508 aaKnown RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 HIC2Q96JB3 615 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 PHF7Q9BWX1 381 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ACAD9Q9H845 621 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 JMJD4Q9H9V9 463 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 USP29Q9HBJ7 922 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 HELLSQ9NRZ9 838 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 IRAK4Q9NWZ3 460 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZDHHC7Q9NXF8 308 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 ASIC5Q9NY37 505 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 TBC1D29Q9UFV1 150 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 GPR34Q9UPC5 381 aa3.29□□□□□ -1.88
HMGB1P9-201ENST00000429856 LMTK3Q96Q04 1460 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 SPATA31A1Q5TZJ5 1347 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 CNTNAP2Q9UHC6 1331 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 PNMA6EA0A0J9YXQ4 647 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 VWA3AA6NCI4 1184 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 PPP6CO00743 305 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZSCAN9O15535 394 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 KLK10O43240 276 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 TMCC2O75069 709 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 TIPRLO75663 272 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 MLYCDO95822 493 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 CELA2AP08217 269 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 NHLRC4P0CG21 123 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 TMIGD3P0DMS9 266 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 CYP2A6P11509 494 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 ALADP13716 330 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 MATN1P21941 496 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 EPHB2P29323 1055 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 SERPINA4P29622 427 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 PBX1P40424 430 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 RGS2P41220 211 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 GSTM5P46439 218 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 POU5F1Q01860 360 aaKnown RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 DEUP1Q05D60 604 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 DNASE1L3Q13609 305 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 SRSF7Q16629 238 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 CCDC96Q2M329 555 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 KLHL22Q53GT1 634 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 ATPAF1Q5TC12 328 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 MSANTD2Q6P1R3 559 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZNF813Q6ZN06 617 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 C16orf71Q8IYS4 520 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 TMEM57Q8N5G2 664 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 TSPYL6Q8N831 410 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 C8orf58Q8NAV2 365 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 CREB3L4Q8TEY5 395 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 SDCCAG3Q96C92 435 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 RNF125Q96EQ8 232 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 C7orf26Q96N11 449 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 EIF3CQ99613 913 aaKnown RBP3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 FAM118BQ9BPY3 351 aa3.28□□□□□ -1.88
HMGB1P9-201ENST00000429856 SDF4Q9BRK5 362 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms