RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ZDHHC7Q9NXF8 308 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 CFAP97Q9P2B7 532 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 FAM153AQ9UHL3 310 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 NFU1Q9UMS0 254 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 ZNF148Q9UQR1 794 aa9.14□□□□□ -0.95
SMC6-204ENST00000428868 DRG1Q9Y295 367 aaKnown RBP9.14□□□□□ -0.95
SMC6-204ENST00000428868 MUC22E2RYF6 1773 aaPredicted RBP9.14□□□□□ -0.95
SMC6-204ENST00000428868 TCF20Q9UGU0 1960 aaKnown RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 TRAV19A0A0A6YYK7 116 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 DRGXA6NNA5 263 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 F5H423 210 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 SGK1O00141 431 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 KCNN4O15554 427 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 XYLBO75191 536 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 PAPLNO95428 1278 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 IFNB1P01574 187 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 POU2F2P09086 479 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 ZFXP17010 805 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 TNFRSF8P28908 595 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 RPL22P35268 128 aaKnown RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 COG7P83436 770 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 GAD2Q05329 585 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 DLX2Q07687 328 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 ADGRE1Q14246 886 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 CBX2Q14781 532 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 PRKD1Q15139 912 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 PABPC1LQ4VXU2 614 aaKnown RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 SLC45A4Q5BKX6 768 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 UBAP2Q5T6F2 1119 aaKnown RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 SYCE2Q6PIF2 218 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 CCNI2Q6ZMN8 369 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 GSTA5Q7RTV2 222 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 MAATS1Q7Z4T9 603 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 TADA2BQ86TJ2 420 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 BBS7Q8IWZ6 715 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 RTL3Q8N8U3 475 aaKnown RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 GRK7Q8WTQ7 553 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 USP13Q92995 863 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 RSPRY1Q96DX4 576 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 C1orf74Q96LT6 269 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 GDAP1L1Q96MZ0 367 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 PWWP2AQ96N64 755 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 RPRD1AQ96P16 312 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 GCNAQ96QF7 691 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 SLC39A8Q9C0K1 460 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 NSUN3Q9H649 340 aaKnown RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 HOMER3Q9NSC5 361 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 ZDHHC18Q9NUE0 388 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 ASIC3Q9UHC3 531 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 ZFP37Q9Y6Q3 630 aaPredicted RBP9.13□□□□□ -0.95
SMC6-204ENST00000428868 SCN8AQ9UQD0 1980 aa9.13□□□□□ -0.95
SMC6-204ENST00000428868 ATG2BQ96BY7 2078 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 MYO10Q9HD67 2058 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 XIRP2A4UGR9 3374 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 TCRBV7S3A2A0A539 114 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 WASH4PA8MWX3 477 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 F5H5T6 163 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 DFFAO00273 331 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 LEFTY2O00292 366 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 GFRA2O00451 464 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 FGF10O15520 208 aaPredicted RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 TBX10O75333 385 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 RHOQP17081 205 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 NR2C2P49116 596 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 HARS2P49590 506 aaKnown RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 ZNF135P52742 658 aaPredicted RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 GALNT2Q10471 571 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 AP1B1Q10567 949 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 ZBTB17Q13105 803 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 USP4Q13107 963 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 LRIT3Q3SXY7 679 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 C5orf22Q49AR2 442 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 SYCP2LQ5T4T6 812 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 FAXCQ5TGI0 409 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 ANKRD22Q5VYY1 191 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 IZUMO3Q5VZ72 239 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 AFMIDQ63HM1 303 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 CCDC70Q6NSX1 233 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 RTL10Q7L3V2 364 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 CDKL3Q8IVW4 592 aaPredicted RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 CMTM8Q8IZV2 173 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 CCDC110Q8TBZ0 833 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 WFDC5Q8TCV5 224 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 SH3RF2Q8TEC5 729 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 AENQ8WTP8 325 aaKnown RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 RSAD2Q8WXG1 361 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 ZBTB9Q96C00 473 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 HMCESQ96FZ2 354 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 ZNF419Q96HQ0 510 aaPredicted RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 RUNDC3BQ96NL0 473 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 LRRC3BQ96PB8 259 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 FRMD8P1Q9BZ68 369 aaPredicted RBP9.12□□□□□ -0.95
SMC6-204ENST00000428868 ZYG11BQ9C0D3 744 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 RAB17Q9H0T7 212 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 ADAM7Q9H2U9 754 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 TASP1Q9H6P5 420 aa9.12□□□□□ -0.95
SMC6-204ENST00000428868 CATSPERBQ9H7T0 1116 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms