RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ERVW-1Q9UQF0 538 aa18.98■□□□□ 0.63
UPK3BP1-201ENST00000428678 A0A1W2PR77 199 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 TLX3O43711 291 aaPredicted RBP18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 EPHA8P29322 1005 aaPredicted RBP18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 EIF2S3P41091 472 aaKnown RBP18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 CTSOP43234 321 aaPredicted RBP18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 CCR5P51681 352 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 ARID5BQ14865 1188 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 PKDCCQ504Y2 493 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 PITRM1Q5JRX3 1037 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 PMF1Q6P1K2 205 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 LCLAT1Q6UWP7 414 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 KDM1BQ8NB78 822 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 OR14C36Q8NHC7 312 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 CLEC4CQ8WTT0 213 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 SLC39A7Q92504 469 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 AZIN2Q96A70 460 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 KIAA1257Q9ULG3 409 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 COQ4Q9Y3A0 265 aa18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 NYNRINQ9P2P1 1898 aaKnown RBP18.97■□□□□ 0.63
UPK3BP1-201ENST00000428678 EDDM13A0A1B0GTR0 161 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 TARSL2A2RTX5 802 aaKnown RBP18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 M0QYV0 167 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 RRP8O43159 456 aaKnown RBP18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 GABBR2O75899 941 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 SRPRAP08240 638 aaKnown RBP18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 ADPRHP54922 357 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 NXPH1P58417 271 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 SLC45A4Q5BKX6 768 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 FSCBQ5H9T9 825 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 RNF219Q5W0B1 726 aaPredicted RBP18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 KRBA2Q6ZNG9 492 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 SND1Q7KZF4 910 aaKnown RBP eCLIP18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 CFAP52Q8N1V2 620 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 AADATQ8N5Z0 425 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 TFAP2BQ92481 460 aa18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 NUCKS1Q9H1E3 243 aaKnown RBP18.96■□□□□ 0.63
UPK3BP1-201ENST00000428678 TENM4Q6N022 2769 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 TLR4O00206 839 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 MOCS3O95396 460 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 MOCS2O96007 188 aaPredicted RBP18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 ADH1BP00325 375 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 GOT1P17174 413 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBXAS1P24557 533 aaPredicted RBP18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 ECT2LQ008S8 904 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 BNIP3Q12983 259 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 FBXL19Q6PCT2 694 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 TMEM270Q6UE05 265 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 STK40Q8N2I9 435 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 UBR7Q8N806 425 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 SLC35F5Q8WV83 523 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 BAP1Q92560 729 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 TSC1Q92574 1164 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 RPL10LQ96L21 214 aaKnown RBP18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 FCRL2Q96LA5 508 aaPredicted RBP18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 FAM129BQ96TA1 746 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 NRSN2Q9GZP1 204 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 MIS12Q9H081 205 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 PRORYQ9H606 182 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 SLCO3A1Q9UIG8 710 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 RAI2Q9Y5P3 530 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 ATMQ13315 3056 aa18.95■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3DA0A087WVF3 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3IA0A087WXS9 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3EA0A087X179 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3KA0A087X1G2 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3FA6NER0 549 aaPredicted RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3LB9A6J9 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TK2O00142 265 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 ATXN7O15265 892 aaPredicted RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 SLC16A3O15427 465 aaKnown RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 LUC7L3O95232 432 aaKnown RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 IL1BP01584 269 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 PAEPP09466 180 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3HP0C7X1 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 C5AR1P21730 350 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 PPP2CBP62714 309 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 PPP2CAP67775 309 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 KRT85P78386 507 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 RTP5Q14D33 572 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 DCAF6Q58WW2 860 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 MS4A13Q5J8X5 152 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3GQ6DHY5 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3CQ6IPX1 549 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TBC1D3Q8IZP1 549 aaPredicted RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 OXR1Q8N573 874 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 DQX1Q8TE96 717 aaKnown RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 SERPINB11Q96P15 392 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 FCRL3Q96P31 734 aaPredicted RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TPX2Q9ULW0 747 aaKnown RBP18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 TLR6Q9Y2C9 796 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 PCDHB4Q9Y5E5 795 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 ITIH6Q6UXX5 1313 aa18.94■□□□□ 0.62
UPK3BP1-201ENST00000428678 C1QL1O75973 258 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 FBXO21O94952 628 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 BRD2P25440 801 aaKnown RBP18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 MZF1P28698 734 aaPredicted RBP18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 NUMBP49757 651 aa18.93■□□□□ 0.62
UPK3BP1-201ENST00000428678 STK19P49842 368 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms