RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KATNA1O75449 491 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 LBPP18428 481 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 ITGA1P56199 1179 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 FAM98BQ52LJ0 330 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PRMT9Q6P2P2 845 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CACUL1Q86Y37 369 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 LGI2Q8N0V4 545 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 TDRD5Q8NAT2 981 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 USP38Q8NB14 1042 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 DDHD1Q8NEL9 900 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CXorf40BQ96DE9 158 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 IL17RAQ96F46 866 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 SEC16BQ96JE7 1060 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PNMA5Q96PV4 448 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 BTBD9Q96Q07 612 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CCT8L2Q96SF2 557 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 ISCUQ9H1K1 167 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 AASDHPPTQ9NRN7 309 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PSME2Q9UL46 239 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CXCR2P25025 360 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 S100GP29377 79 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 SERPINA4P29622 427 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 SOX10P56693 466 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CNTN2Q02246 1040 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 FGD3Q5JSP0 725 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 ARMC4Q5T2S8 1044 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 FOXR1Q6PIV2 292 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 FAM220AQ7Z4H9 259 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CYP2W1Q8TAV3 490 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 HTATIP2Q9BUP3 242 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 NMRAL1Q9HBL8 299 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 RBM12Q9NTZ6 932 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PAIP2BQ9ULR5 123 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 BCLAF3A2AJT9 711 aaKnown RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 C1QTNF3-AMACRE9PGA6 284 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ATG7O95352 703 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 UBTFL6P0CB48 400 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 INSRRP14616 1297 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 KCNJ1P48048 391 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CD151P48509 253 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 SERPINH1P50454 418 aaKnown RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ARMC12Q5T9G4 340 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 RNF44Q7L0R7 432 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TLK2Q86UE8 772 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TMEM132CQ8N3T6 1108 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 LZTR1Q8N653 840 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 OR56A4Q8NGH8 313 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 APBB2Q92870 758 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 UBE2E3Q969T4 207 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ELOVL4Q9GZR5 314 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ABHD16BQ9H3Z7 469 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 UBDO15205 165 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 SEC22BO75396 215 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CSDE1O75534 798 aaKnown RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CABYRO75952 493 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CASP4P49662 377 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 LAMTOR4Q0VGL1 99 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CBWD6Q4V339 395 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ERMARDQ5T6L9 678 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ZDHHC17Q8IUH5 632 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TRAPPC5Q8IUR0 188 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 IZUMO1Q8IYV9 350 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 AHI1Q8N157 1196 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 FBXO39Q8N4B4 442 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ATP8B4Q8TF62 1192 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 FIG4Q92562 907 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ZDHHC6Q9H6R6 413 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 SNTG2Q9NY99 539 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 SPATA2Q9UM82 520 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TRAV19A0A0A6YYK7 116 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 URADA6NGE7 173 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 PDE2AO00408 941 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TSC22D2O75157 780 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 STX11O75558 287 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 VHLP40337 213 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 RHBDL3P58872 404 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 IL5RAQ01344 420 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CDH17Q12864 832 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 COLGALT1Q8NBJ5 622 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 DNAJB3Q8WWF6 145 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 APOL2Q9BQE5 337 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 ABCG4Q9H172 646 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 EPB41L4BQ9H329 900 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TAS2R13Q9NYV9 303 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TRPV2Q9Y5S1 764 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 RIC1Q4ADV7 1423 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 H3BN98 237 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 MYL12BO14950 172 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 SGPL1O95470 568 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 TUBP50607 506 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 OTUD4Q01804 1114 aaKnown RBP9.11□□□□□ -0.95
CTNND1-208ENST00000428599 KCNT1Q5JUK3 1230 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 FAAH2Q6GMR7 532 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 BNIPLQ7Z465 357 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 MILR1Q7Z6M3 343 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 KRT73Q86Y46 540 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 SVOPQ8N4V2 548 aa9.11□□□□□ -0.95
CTNND1-208ENST00000428599 CCDC33Q8N5R6 958 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms