RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LINC00299Q6ZSB3 139 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 FAM71DQ8N9W8 422 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 RAB2BQ8WUD1 216 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 STON2Q8WXE9 905 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 TRIB2Q92519 343 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 EFHD1Q9BUP0 239 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 PLAC1Q9HBJ0 212 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 THG1LQ9NWX6 298 aaKnown RBP16.44■□□□□ 0.22
C9orf3-206ENST00000428313 SAE1Q9UBE0 346 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-206ENST00000428313 DCDC2Q9UHG0 476 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 PSME2Q9UL46 239 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ARHGEF35A5YM69 484 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 VAPBO95292 243 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 BMP2P12643 396 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ENO3P13929 434 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-206ENST00000428313 IDUAP35475 653 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 TPTEP56180 551 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 DYNLT1P63172 113 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ART3Q13508 389 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 INSCQ1MX18 579 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 USP37Q86T82 979 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 BPHLQ86WA6 291 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-206ENST00000428313 CBWD2Q8IUF1 395 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 C10orf107Q8IVU9 208 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 THNSL1Q8IYQ7 743 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 NACC2Q96BF6 587 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ERLEC1Q96DZ1 483 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 MED30Q96HR3 178 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 FEM1CQ96JP0 617 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 CIB1Q99828 191 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ST6GALNAC4Q9H4F1 302 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 EFCAB1Q9HAE3 211 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 MAGEE1Q9HCI5 957 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 PRELID1Q9Y255 219 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 C9IYK1 514 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 F8VP50 259 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 M0QX08 132 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CSPG5O95196 566 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 TOP3BO95985 862 aaKnown RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 AKR1B1P15121 316 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 RPL10P27635 214 aaKnown RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 MZF1P28698 734 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 PRELPP51888 382 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 GTF2BQ00403 316 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 TRAP1Q12931 704 aaKnown RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 PPIL2Q13356 520 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 TUBA3CQ13748 450 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 KCTD8Q6ZWB6 473 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 USP43Q70EL4 1123 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 SH3YL1Q96HL8 342 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 ADAMTS10Q9H324 1103 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 HACD3Q9P035 362 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 SNX13Q9Y5W8 968 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 TCRBV3S1A0A5B6 114 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 AREL1O15033 823 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 AVILO75366 819 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 PSMD10O75832 226 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 JUNBP17275 347 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 OSBPP22059 807 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 FGFR3P22607 806 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 TAP1Q03518 808 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 ENPEPQ07075 957 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 NSUN2Q08J23 767 aaKnown RBP eCLIP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 TRIM25Q14258 630 aaKnown RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 HMBOX1Q6NT76 420 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 RSBN1LQ6PCB5 846 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 AGMOQ6ZNB7 445 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CHSY3Q70JA7 882 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 HEATR4Q86WZ0 1026 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 HERC6Q8IVU3 1022 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CNTD1Q8N815 330 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 USP33Q8TEY7 942 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 ACSF2Q96CM8 615 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CD320Q9NPF0 282 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 SMOXQ9NWM0 555 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CRNNQ9UBG3 495 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-206ENST00000428313 TCAF1Q9Y4C2 921 aa16.43■□□□□ 0.22
C9orf3-206ENST00000428313 CNTNAP2Q9UHC6 1331 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ILVBLA1L0T0 632 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 GOLGA8IPA6NC78 632 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 GOLGA8JA6NMD2 632 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 TTC34A8MYJ7 566 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 APOC4-APOC2K7ER74 178 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 GUCY1B2O75343 617 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 APOC2P02655 101 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ENO2P09104 434 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 OPRL1P41146 370 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 GRM5P41594 1212 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 OCA2Q04671 838 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 INTS11Q5TA45 600 aaKnown RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 SLX4IPQ5VYV7 408 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 SV2AQ7L0J3 742 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms