RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 ATP11CQ8NB49 1132 aa7.22□□□□□ -1.25
CDC7-203ENST00000428239 TPCN2Q8NHX9 752 aa7.22□□□□□ -1.25
CDC7-203ENST00000428239 ATRIPQ8WXE1 791 aa7.22□□□□□ -1.25
CDC7-203ENST00000428239 C2orf49Q9BVC5 232 aaPredicted RBP7.22□□□□□ -1.25
CDC7-203ENST00000428239 ADAM33Q9BZ11 813 aa7.22□□□□□ -1.25
CDC7-203ENST00000428239 CACNA2D2Q9NY47 1150 aa7.22□□□□□ -1.25
CDC7-203ENST00000428239 SEPT10Q9P0V9 454 aa7.22□□□□□ -1.25
CDC7-203ENST00000428239 GGA2Q9UJY4 613 aa7.22□□□□□ -1.25
CDC7-203ENST00000428239 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDC7-203ENST00000428239 KRBA1A5PL33 1030 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 FAM72CH0Y354 149 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 EGFP01133 1207 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 EPHX1P07099 455 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 DRD1P21728 446 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 SERPINB6P35237 376 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 ETFBP38117 255 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 CDH4P55283 916 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 OXCT1P55809 520 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 GSCP56915 257 aaPredicted RBP7.21□□□□□ -1.25
CDC7-203ENST00000428239 TAS2R40P59535 323 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 ZNF211Q13398 564 aaPredicted RBP7.21□□□□□ -1.25
CDC7-203ENST00000428239 TMEM31Q5JXX7 168 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 DNTTIP2Q5QJE6 756 aaKnown RBP7.21□□□□□ -1.25
CDC7-203ENST00000428239 FAM72AQ5TYM5 149 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 EMC10Q5UCC4 262 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 TXNRD3NBQ6F5E7 133 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 FAM72DQ6L9T8 149 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 LINGO4Q6UY18 593 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 Q6ZNB5 142 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 ADAT2Q7Z6V5 191 aaKnown RBP7.21□□□□□ -1.25
CDC7-203ENST00000428239 FAM72BQ86X60 149 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 TMEM139Q8IV31 216 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 CPXM2Q8N436 756 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 OR7D4Q8NG98 312 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 RPLP0P6Q8NHW5 317 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 LTB4R2Q9NPC1 389 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 ARHGEF38Q9NXL2 777 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 FZD10Q9ULW2 581 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 REXO2Q9Y3B8 237 aaKnown RBP7.21□□□□□ -1.25
CDC7-203ENST00000428239 FARP1Q9Y4F1 1045 aaPredicted RBP7.21□□□□□ -1.25
CDC7-203ENST00000428239 SDK1Q7Z5N4 2213 aa7.21□□□□□ -1.25
CDC7-203ENST00000428239 PTPRDP23468 1912 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 LAMTOR5O43504 91 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 SLC34A2O95436 690 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 KLF8O95600 359 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 ERCC2P18074 760 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 TARSP26639 723 aaKnown RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 IL1R2P27930 398 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 HOXD9P28356 352 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 L1CAMP32004 1257 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 CD70P32970 193 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 IRAK1P51617 712 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 RWDD2BP57060 319 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 ZNF252P-AS1Q0IIN9 211 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 LMAN2Q12907 356 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 MMRN1Q13201 1228 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 GEN1Q17RS7 908 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 OTUD1Q5VV17 481 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 KIAA1324Q6UXG2 1013 aaKnown RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 RFX8Q6ZV50 586 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 C17orf53Q8N3J3 647 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 NTAN1Q96AB6 310 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 PGAP3Q96FM1 320 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 PRICKLE1Q96MT3 831 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 PEBP4Q96S96 227 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 ANLNQ9NQW6 1124 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 DDX56Q9NY93 547 aaKnown RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 ATG2BQ96BY7 2078 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 KCNK3O14649 394 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 IGLV3-25P01717 112 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 IGLV3-27P01718 113 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 TNNT3P45378 269 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 PXNP49023 591 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 AIF1P55008 147 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 ACBD5Q5T8D3 534 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 FYB2Q5VWT5 728 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 RETSATQ6NUM9 610 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 Q6ZS52 159 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 AHI1Q8N157 1196 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 ATPAF2Q8N5M1 289 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 ALLCQ8N6M5 410 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 TXNDC5Q8NBS9 432 aaKnown RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 TRIM58Q8NG06 486 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 NT5C3BQ969T7 300 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 KCTD15Q96SI1 283 aaPredicted RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 FERMT1Q9BQL6 677 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 FBRSL1Q9HCM7 1045 aaKnown RBP7.21□□□□□ -1.26
CDC7-203ENST00000428239 ELOVL2Q9NXB9 296 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 CLEC4EQ9ULY5 219 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 CAPN6Q9Y6Q1 641 aa7.21□□□□□ -1.26
CDC7-203ENST00000428239 A0A0A6YYK5 440 aaPredicted RBP7.2□□□□□ -1.26
CDC7-203ENST00000428239 TCRBV5S1A1TA0A578 114 aa7.2□□□□□ -1.26
CDC7-203ENST00000428239 ARHGAP42A6NI28 874 aa7.2□□□□□ -1.26
CDC7-203ENST00000428239 ENC1O14682 589 aa7.2□□□□□ -1.26
CDC7-203ENST00000428239 FGF10O15520 208 aaPredicted RBP7.2□□□□□ -1.26
CDC7-203ENST00000428239 HOXC11O43248 304 aaPredicted RBP7.2□□□□□ -1.26
CDC7-203ENST00000428239 CACNG3O60359 315 aa7.2□□□□□ -1.26
CDC7-203ENST00000428239 PAPLNO95428 1278 aa7.2□□□□□ -1.26
CDC7-203ENST00000428239 HLA-EP13747 358 aa7.2□□□□□ -1.26
CDC7-203ENST00000428239 HOXB2P14652 356 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms