RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 RFC1P35251 1148 aaPredicted RBP15.34■□□□□ 0.05
RTN4-210ENST00000427710 PBX1P40424 430 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 CREB5Q02930 508 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 SF3A2Q15428 464 aaKnown RBP15.34■□□□□ 0.05
RTN4-210ENST00000427710 ELF2Q15723 593 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 ALFQ53S48 1182 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 ACAD10Q6JQN1 1059 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 CPLX3Q8WVH0 158 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 TTC17Q96AE7 1141 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 MYO19Q96H55 970 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 SPACA7Q96KW9 195 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 TMEM245Q9H330 911 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 PRDM16Q9HAZ2 1276 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 SEMA4GQ9NTN9 838 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 KIAA1522Q9P206 1035 aaPredicted RBP15.34■□□□□ 0.05
RTN4-210ENST00000427710 MYO6Q9UM54 1294 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 PLA2G4CQ9UP65 541 aa15.34■□□□□ 0.05
RTN4-210ENST00000427710 ASCC3Q8N3C0 2202 aaKnown RBP15.33■□□□□ 0.05
RTN4-210ENST00000427710 LAMA1P25391 3075 aa15.33■□□□□ 0.05
RTN4-210ENST00000427710 IGHV1OR15-9A0A0B4J2B8 117 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 A0A1B0GVM2 712 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 TCAF2A6NFQ2 919 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 NPC1O15118 1278 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 F9P00740 461 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 ATP5BP06576 529 aaKnown RBP15.33■□□□□ 0.04
RTN4-210ENST00000427710 DLDP09622 509 aaKnown RBP15.33■□□□□ 0.04
RTN4-210ENST00000427710 CCDC172P0C7W6 258 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 KRT3P12035 628 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 SDC4P31431 198 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 STK19P49842 368 aaPredicted RBP15.33■□□□□ 0.04
RTN4-210ENST00000427710 COPAP53621 1224 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 PLEKHG6Q3KR16 790 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 ARTNQ5T4W7 220 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 TCEAL6Q6IPX3 200 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 CXorf57Q6NSI4 855 aaKnown RBP15.33■□□□□ 0.04
RTN4-210ENST00000427710 WDR59Q6PJI9 974 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 TMPRSS6Q8IU80 811 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 ZNF683Q8IZ20 524 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 MCOLN2Q8IZK6 566 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 RNF214Q8ND24 703 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 TCEAL3Q969E4 200 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 RPL10LQ96L21 214 aaKnown RBP15.33■□□□□ 0.04
RTN4-210ENST00000427710 MRGPRX3Q96LB0 322 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 TSPY26PQ9H489 355 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 AIPL1Q9NZN9 384 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 MPP6Q9NZW5 540 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 ERVW-1Q9UQF0 538 aa15.33■□□□□ 0.04
RTN4-210ENST00000427710 DCHS1Q96JQ0 3298 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 TCRBV5S1A1TA0A578 114 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 TTC34A8MYJ7 566 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 DDX3XO00571 662 aaKnown RBP eCLIP15.32■□□□□ 0.042e-35■□□□□ 10.1
RTN4-210ENST00000427710 GDF9O60383 454 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 SRGAP2O75044 1071 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 GPD1P21695 349 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 RRM1P23921 792 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 MPLP40238 635 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 PTGER3P43115 390 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 RPL7AP62424 266 aaKnown RBP15.32■□□□□ 0.04
RTN4-210ENST00000427710 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
RTN4-210ENST00000427710 KLHL30Q0D2K2 578 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 DNAJC24Q6P3W2 148 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 PRR23CQ6ZRP0 262 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 ARCQ7LC44 396 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 ZNF557Q8N988 423 aaPredicted RBP15.32■□□□□ 0.04
RTN4-210ENST00000427710 C3orf20Q8ND61 904 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 OR2T3Q8NH03 318 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 FAM172AQ8WUF8 416 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 SIPA1Q96FS4 1042 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 LOXL4Q96JB6 756 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 MCEEQ96PE7 176 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 XPO4Q9C0E2 1151 aaKnown RBP15.32■□□□□ 0.04
RTN4-210ENST00000427710 PRSS16Q9NQE7 514 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 RXFP3Q9NSD7 469 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 SLCO3A1Q9UIG8 710 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 ATXN2Q99700 1313 aaKnown RBP15.32■□□□□ 0.04
RTN4-210ENST00000427710 CACNA1EQ15878 2313 aa15.32■□□□□ 0.04
RTN4-210ENST00000427710 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 SIGLEC16A6NMB1 481 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 E9PAM4 449 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 CCP110O43303 1012 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 SIN3BO75182 1162 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 ENDOD1O94919 500 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 MOCS3O95396 460 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 CAVIN2O95810 425 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 HDAC4P56524 1084 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 OGDHQ02218 1023 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 RPL6Q02878 288 aaKnown RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 ZNF177Q13360 481 aaPredicted RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 CAMK2GQ13555 558 aaPredicted RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 RSPO4Q2I0M5 234 aaPredicted RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 C5orf22Q49AR2 442 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 TTC39BQ5VTQ0 682 aaPredicted RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 RNF219Q5W0B1 726 aaPredicted RBP15.31■□□□□ 0.04
RTN4-210ENST00000427710 LRSAM1Q6UWE0 723 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 LPCAT2Q7L5N7 544 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 CYP2U1Q7Z449 544 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 TFAP2DQ7Z6R9 452 aa15.31■□□□□ 0.04
RTN4-210ENST00000427710 FAM124AQ86V42 546 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms