RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 SLC5A3P53794 718 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 NR1H3Q13133 447 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 PLD1Q13393 1074 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 PPIGQ13427 754 aaKnown RBP eCLIP8.77□□□□□ -13e-7■□□□□ 10.6
SH3D19-204ENST00000427414 LBRQ14739 615 aaKnown RBP8.77□□□□□ -1
SH3D19-204ENST00000427414 STAT4Q14765 748 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 PRKD1Q15139 912 aaPredicted RBP8.77□□□□□ -1
SH3D19-204ENST00000427414 MUM1Q2TAK8 710 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 ZC3H12AQ5D1E8 599 aaKnown RBP8.77□□□□□ -1
SH3D19-204ENST00000427414 FAM171A1Q5VUB5 890 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 UBE2Q1Q7Z7E8 422 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 TDRPQ86YL5 185 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 CYP4X1Q8N118 509 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 SLC39A11Q8N1S5 342 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 NAT8LQ8N9F0 302 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 PHOSPHO2Q8TCD6 241 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 RNF139Q8WU17 664 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 DNAJC9Q8WXX5 260 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 TRMT2BQ96GJ1 504 aaKnown RBP8.77□□□□□ -1
SH3D19-204ENST00000427414 MYRFLQ96LU7 910 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 ZNF558Q96NG5 402 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 KCNK16Q96T55 309 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 LPIN3Q9BQK8 851 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 CCDC77Q9BR77 488 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 UBE2OQ9C0C9 1292 aaKnown RBP8.77□□□□□ -1
SH3D19-204ENST00000427414 WDCPQ9H6R7 721 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 IL23AQ9NPF7 189 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 TLR8Q9NR97 1041 aaKnown RBP8.77□□□□□ -1
SH3D19-204ENST00000427414 DLGAP2Q9P1A6 1054 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 DNAJB4Q9UDY4 337 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 HBS1LQ9Y450 684 aaKnown RBP8.77□□□□□ -1
SH3D19-204ENST00000427414 MYO16Q9Y6X6 1858 aa8.77□□□□□ -1
SH3D19-204ENST00000427414 SCN5AQ14524 2016 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 ERI2A8K979 691 aaKnown RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 B4GALT3O60512 393 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 OPHN1O60890 802 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 ABLIM3O94929 683 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TTC4O95801 387 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 LATS1O95835 1130 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 NCAM1P13591 858 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 EPHB2P29323 1055 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 CCR1P32246 355 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 FOXN2P32314 431 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 CHKAP35790 457 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 C1QTNF8P60827 252 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 IL9RQ01113 521 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TNK2Q07912 1038 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SLC39A12Q504Y0 691 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 KCNT1Q5JUK3 1230 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SH3PXD2AQ5TCZ1 1133 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TMCO4Q5TGY1 634 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 MANEALQ5VSG8 457 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 BTBD8Q5XKL5 378 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 KAZNQ674X7 775 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SCYL2Q6P3W7 929 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 RFX8Q6ZV50 586 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 CENPUQ71F23 418 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 CCNJLQ8IV13 435 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 GALNT15Q8N3T1 639 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 ATG4AQ8WYN0 398 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SLC39A13Q96H72 371 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TSGA13Q96PP4 275 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TMEM106CQ9BVX2 250 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TBC1D10AQ9BXI6 508 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 DHX35Q9H5Z1 703 aaKnown RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 CATSPERBQ9H7T0 1116 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TRHDEQ9UKU6 1024 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 LZTS1Q9Y250 596 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 RWDD3Q9Y3V2 267 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TIMM13Q9Y5L4 95 aaPredicted RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 ACTL7BQ9Y614 415 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 KIAA1671Q9BY89 1806 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 MTMR11A4FU01 709 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 KCNU1A8MYU2 1149 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SGK1O00141 431 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 ENTPD5O75356 428 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 GRAP2O75791 330 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 USP17L7P0C7H9 530 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 YWHAQP27348 245 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 ALDH3A1P30838 453 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 GJC1P36383 396 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 ARL4CP56559 192 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SESN3P58005 492 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 HTRA4P83105 476 aaPredicted RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 FRG1Q14331 258 aaKnown RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 CDO1Q16878 200 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 SMTNL2Q2TAL5 461 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 C5orf22Q49AR2 442 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 RNF220Q5VTB9 566 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 DAB2IPQ5VWQ8 1189 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 NCBP2-AS2Q69YL0 99 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 DARS2Q6PI48 645 aaKnown RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TTC8Q8TAM2 541 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 DQX1Q8TE96 717 aaKnown RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 TFB1MQ8WVM0 346 aaKnown RBP8.77□□□□□ -1.01
SH3D19-204ENST00000427414 HDAC11Q96DB2 347 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 VWCEQ96DN2 955 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 KLC2Q9H0B6 622 aa8.77□□□□□ -1.01
SH3D19-204ENST00000427414 VCXQ9H320 206 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms