RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 C10orf76Q5T2E6 689 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ADGRF1Q5T601 910 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 NAIF1Q69YI7 327 aaPredicted RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 DCUN1D2Q6PH85 259 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 TXNDC11Q6PKC3 985 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 STRADAQ7RTN6 431 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 BMP8AQ7Z5Y6 402 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 RALGPS2Q86X27 583 aaPredicted RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 CPA6Q8N4T0 437 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ARFGAP1Q8N6T3 406 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ATP6V0D2Q8N8Y2 350 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 RNF34Q969K3 372 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 PBXIP1Q96AQ6 731 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MYEOVQ96EZ4 313 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 BTN2A3PQ96KV6 586 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MCEEQ96PE7 176 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 EIF3CQ99613 913 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 PRMT1Q99873 361 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 BAG1Q99933 345 aaPredicted RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 CNPY3Q9BT09 278 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MAGEB5Q9BZ81 275 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ZCCHC2Q9C0B9 1178 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 WDCPQ9H6R7 721 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 FAM204AQ9H8W3 233 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MRPL47Q9HD33 250 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ARHGEF3Q9NR81 526 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 TMEM51Q9NW97 253 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ZDHHC3Q9NYG2 299 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MARK1Q9P0L2 795 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 COX16Q9P0S2 106 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 FBXO10Q9UK96 956 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 FBXL21Q9UKT6 434 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 INTUQ9ULD6 942 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SCINQ9Y6U3 715 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 PIAS3Q9Y6X2 628 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 COL4A3Q01955 1670 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 TMEM221A6NGB7 291 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 M0R296 226 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 DLL1O00548 723 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 MAN2B1O00754 1011 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 BNIP3LO60238 219 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 TSPAN3O60637 253 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 PAGE1O75459 146 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 NDUFA10O95299 355 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 MOCS2O96007 188 aaPredicted RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 PDGFBP01127 241 aaPredicted RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 PENKP01210 267 aaPredicted RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 APOEP02649 317 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 CISD3P0C7P0 127 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 SLC2A3P11169 496 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 ADH5P11766 374 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 RDXP35241 583 aaKnown RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 ADRA1BP35368 520 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 CYLC1P35663 651 aaPredicted RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 VCPP55072 806 aaKnown RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 GSDMDP57764 484 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 GAD2Q05329 585 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 MESP2Q0VG99 397 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 LBRQ14739 615 aaKnown RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 TCEAL1Q15170 157 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 CDO1Q16878 200 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 MS4A13Q5J8X5 152 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 PIK3R6Q5UE93 754 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 FYB2Q5VWT5 728 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 RNF43Q68DV7 783 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 RFWD3Q6PCD5 774 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 TPGS1Q6ZTW0 290 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 TPRG1Q6ZUI0 275 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 C14orf80Q86SX3 495 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 FAM131BQ86XD5 332 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 LRRC8AQ8IWT6 810 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 ETFBKMTQ8IXQ9 262 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 ZNF683Q8IZ20 524 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 SVOPQ8N4V2 548 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 SLC35G2Q8TBE7 412 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 FNIP1Q8TF40 1166 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 FAM172AQ8WUF8 416 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 FAM3CQ92520 227 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 TMA16Q96EY4 203 aaKnown RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 SHDQ96IW2 340 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 BTBD6Q96KE9 485 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 C1orf74Q96LT6 269 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 NUP85Q9BW27 656 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 PHACTR1Q9C0D0 580 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 TKTL2Q9H0I9 626 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 C11orf16Q9NQ32 467 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 SLC12A6Q9UHW9 1150 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 CLEC4EQ9ULY5 219 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 REXO2Q9Y3B8 237 aaKnown RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 MTF2Q9Y483 593 aaPredicted RBP7.67□□□□□ -1.18
LINC01049-201ENST00000426840 PCDHA13Q9Y5I0 950 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 SNX10Q9Y5X0 201 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 HS3ST4Q9Y661 456 aa7.67□□□□□ -1.18
LINC01049-201ENST00000426840 A0A0A0MRY4 1105 aa7.66□□□□□ -1.18
LINC01049-201ENST00000426840 KANSL1LA0AUZ9 987 aa7.66□□□□□ -1.18
LINC01049-201ENST00000426840 FAM170BA6NMN3 283 aa7.66□□□□□ -1.18
LINC01049-201ENST00000426840 DRGXA6NNA5 263 aa7.66□□□□□ -1.18
LINC01049-201ENST00000426840 KHNYNO15037 678 aaKnown RBP7.66□□□□□ -1.18
LINC01049-201ENST00000426840 TRIM24O15164 1050 aa7.66□□□□□ -1.18
LINC01049-201ENST00000426840 ATXN7O15265 892 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms