RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FAM32AQ9Y421 112 aaKnown RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 RGPD2P0DJD1 1756 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 C10orf71Q711Q0 1435 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 PDZK1P1A8MUH7 402 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CPA3P15088 417 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CRABP2P29373 138 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 APLP1P51693 650 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 HIRAP54198 1017 aaPredicted RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 HPCAP84074 193 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 ENPEPQ07075 957 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 KBTBD12Q3ZCT8 623 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SETMARQ53H47 684 aaPredicted RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 UTP6Q9NYH9 597 aaKnown RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 NCKIPSDQ9NZQ3 722 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SCN11AQ9UI33 1791 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SCAMP3O14828 347 aaKnown RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 AIM2O14862 343 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CAPN15O75808 1086 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SLC25A52Q3SY17 297 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SEC16BQ96JE7 1060 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SEMA4AQ9H3S1 761 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 FZD8Q9H461 694 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 PIH1D1Q9NWS0 290 aaKnown RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPL28-202ENST00000426763 C1QTNF3-AMACRE9PGA6 284 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 ARVCFO00192 962 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 RIPK2O43353 540 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CAND2O75155 1236 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SKAP2O75563 359 aaPredicted RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 INPP1P49441 399 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 RPL7AP62424 266 aaKnown RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 JAG1P78504 1218 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 LRRC74AQ0VAA2 488 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 TP53BP2Q13625 1128 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 NPNTQ6UXI9 565 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 KDM7AQ6ZMT4 941 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CACUL1Q86Y37 369 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 OMDQ99983 421 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 BBS2Q9BXC9 721 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SHCBP1LQ9BZQ2 653 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 C11orf49Q9H6J7 331 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 STX18Q9P2W9 335 aaKnown RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 GTF2IRD1Q9UHL9 959 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 TM9SF1O15321 606 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 CHADO15335 359 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 CST3P01034 146 aaPredicted RBP14.15□□□□□ -0.14
RPL28-202ENST00000426763 GRK2P25098 689 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 RBBP8Q99708 897 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 NTPCRQ9BSD7 190 aaKnown RBP14.15□□□□□ -0.14
RPL28-202ENST00000426763 NAALADL1Q9UQQ1 740 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 KDM3BQ7LBC6 1761 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 ANKRD65E5RJM6 399 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 SPATA31D3P0C874 917 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 CCNB1P14635 433 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 TAF10Q12962 218 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 SERPINA13PQ6UXR4 307 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 SPATA31D4Q6ZUB0 917 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 STK40Q8N2I9 435 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 DBF4BQ8NFT6 615 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 NPLOC4Q8TAT6 608 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 IL22Q9GZX6 179 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 ATP13A3Q9H7F0 1226 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 RAD54BQ9Y620 910 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 FAM95CA0A1B0GW59 222 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 EPB42P16452 691 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 PSMB4P28070 264 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 RARS2Q5T160 578 aaKnown RBP14.15□□□□□ -0.14
RPL28-202ENST00000426763 STRADAQ7RTN6 431 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 RD3Q7Z3Z2 195 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 PRPF39Q86UA1 669 aaKnown RBP14.15□□□□□ -0.14
RPL28-202ENST00000426763 MAGEB18Q96M61 343 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 ACBD6Q9BR61 282 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 C17orf80Q9BSJ5 609 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 ITM2BQ9Y287 266 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 ZNF536O15090 1300 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 CRYBG1Q9Y4K1 1723 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 SLCO1B7G3V0H7 640 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 GOT1P17174 413 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 ITGB6P18564 788 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 CD86P42081 329 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 CREG2Q8IUH2 290 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 AGGF1Q8N302 714 aaeCLIP14.15□□□□□ -0.14
RPL28-202ENST00000426763 ZCCHC9Q8N567 271 aaKnown RBP14.15□□□□□ -0.14
RPL28-202ENST00000426763 ATAD1Q8NBU5 361 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 MORF4L1Q9UBU8 362 aa14.15□□□□□ -0.14
RPL28-202ENST00000426763 A0A1W2PQH9 124 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 ADH1CP00326 375 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 OR4Q2P0C623 313 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 FSTL1Q12841 308 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 PCID2Q5JVF3 399 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 TRIML2Q8N7C3 387 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 TDRD5Q8NAT2 981 aaKnown RBP14.14□□□□□ -0.15
RPL28-202ENST00000426763 TNIP2Q8NFZ5 429 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 GRIN3AQ8TCU5 1115 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 CXorf40AQ8TE69 158 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 GAS2L1Q99501 681 aaPredicted RBP14.14□□□□□ -0.15
RPL28-202ENST00000426763 MLPHQ9BV36 600 aaPredicted RBP14.14□□□□□ -0.15
RPL28-202ENST00000426763 NMRAL1Q9HBL8 299 aa14.14□□□□□ -0.15
RPL28-202ENST00000426763 SFMBT1Q9UHJ3 866 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms