RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 TADA2BQ86TJ2 420 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 C10orf67Q8IYJ2 551 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 ZNF276Q8N554 614 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 UHMK1Q8TAS1 419 aaKnown RBP15.44■□□□□ 0.06
CALD1-206ENST00000424922 PPM1EQ8WY54 764 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 CHMP6Q96FZ7 201 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 EPAS1Q99814 870 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 TMEM121Q9BTD3 319 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 OSBPL2Q9H1P3 480 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 C10orf88Q9H8K7 445 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 LGALS13Q9UHV8 139 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 MSRAQ9UJ68 235 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 DNMT3LQ9UJW3 386 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 SH3BP1Q9Y3L3 701 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 MYO18AQ92614 2054 aaKnown RBP15.44■□□□□ 0.06
CALD1-206ENST00000424922 C2orf78A6NCI8 922 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 SMIM23A6NLE4 172 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 MCF2LO15068 1137 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 COCHO43405 550 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 KIAA0754O94854 1291 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 LRIG2O94898 1065 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 SRGAP2BP0DMP2 458 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 ZFXP17010 805 aaPredicted RBP15.44■□□□□ 0.06
CALD1-206ENST00000424922 PPP3CCP48454 512 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 DPYSQ14117 519 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 NOMO1Q15155 1222 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 KYNUQ16719 465 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 NCBP2-AS2Q69YL0 99 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 ZC3H18Q86VM9 953 aaKnown RBP15.44■□□□□ 0.06
CALD1-206ENST00000424922 MDM1Q8TC05 714 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 SLC22A17Q8WUG5 538 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 SELENOSQ9BQE4 189 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 PCDH9Q9HC56 1237 aa15.44■□□□□ 0.06
CALD1-206ENST00000424922 PER2O15055 1255 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 CCL16O15467 120 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 CLASP2O75122 1294 aaKnown RBP15.43■□□□□ 0.06
CALD1-206ENST00000424922 CPP00450 1065 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 APOEP02649 317 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 F11P03951 625 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 RBP3P10745 1247 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 DRD4P21917 467 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 SLCO1A2P46721 670 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 HCAR3P49019 387 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 VPS41P49754 854 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 GBE1Q04446 702 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 MORF4L2Q15014 288 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 P3H1Q32P28 736 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 PPM1LQ5SGD2 360 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 PPP2R2DQ66LE6 453 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 EXOC3L1Q86VI1 746 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 HS6ST3Q8IZP7 471 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 ELMOD1Q8N336 334 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 RIBC1Q8N443 379 aaPredicted RBP15.43■□□□□ 0.06
CALD1-206ENST00000424922 ARNTL2Q8WYA1 636 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 TTC25Q96NG3 672 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 ZNF317Q96PQ6 595 aaPredicted RBP15.43■□□□□ 0.06
CALD1-206ENST00000424922 CCDC77Q9BR77 488 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 PHACTR1Q9C0D0 580 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 IL21Q9HBE4 155 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 MAN1C1Q9NR34 630 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 INTS9Q9NV88 658 aaKnown RBP15.43■□□□□ 0.06
CALD1-206ENST00000424922 TPX2Q9ULW0 747 aaKnown RBP15.43■□□□□ 0.06
CALD1-206ENST00000424922 HS3ST4Q9Y661 456 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 EPCAMP16422 314 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 ERCC2P18074 760 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 EPHB2P29323 1055 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 SLC10A2Q12908 348 aaPredicted RBP15.43■□□□□ 0.06
CALD1-206ENST00000424922 LONRF1Q17RB8 773 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 PRUNE1Q86TP1 453 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 RBM23Q86U06 439 aaKnown RBP15.43■□□□□ 0.06
CALD1-206ENST00000424922 CCDC33Q8N5R6 958 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 RNF38Q9H0F5 515 aa15.43■□□□□ 0.06
CALD1-206ENST00000424922 NOTCH4Q99466 2003 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 H7C0C1 242 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 SGK1O00141 431 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 DCLK1O15075 740 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 RFPL2O75678 378 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 OAS1P00973 400 aaKnown RBP15.42■□□□□ 0.06
CALD1-206ENST00000424922 IGLV3-27P01718 113 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 GABRR2P28476 465 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 MAGEA4P43358 317 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 ATP5OP48047 213 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 TUBP50607 506 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 KCNQ1P51787 676 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 KPNA1P52294 538 aaPredicted RBP15.42■□□□□ 0.06
CALD1-206ENST00000424922 ZNF135P52742 658 aaPredicted RBP15.42■□□□□ 0.06
CALD1-206ENST00000424922 RING1Q06587 406 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 RAB30Q15771 203 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 PABPC1LQ4VXU2 614 aaKnown RBP15.42■□□□□ 0.06
CALD1-206ENST00000424922 PIK3R6Q5UE93 754 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 PDE12Q6L8Q7 609 aaKnown RBP15.42■□□□□ 0.06
CALD1-206ENST00000424922 RWDD4Q6NW29 188 aaKnown RBP15.42■□□□□ 0.06
CALD1-206ENST00000424922 DARS2Q6PI48 645 aaKnown RBP15.42■□□□□ 0.06
CALD1-206ENST00000424922 KLHDC10Q6PID8 442 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 ATP6V0D2Q8N8Y2 350 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 NETO2Q8NC67 525 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 LRRN4Q8WUT4 740 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 TRPC7Q9HCX4 862 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 SHOC2Q9UQ13 582 aa15.42■□□□□ 0.06
CALD1-206ENST00000424922 HBS1LQ9Y450 684 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms