RNA–Protein interactions for RNA: ENST00000423536.5

SNHG17-204, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 517 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-204ENST00000423536 APOLD1Q96LR9 279 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 USP28Q96RU2 1077 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 CALN1Q9BXU9 219 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 PANK2Q9BZ23 570 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 LRRC27Q9C0I9 530 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 SYNDIG1Q9H7V2 258 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 OLFML3Q9NRN5 406 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 OLA1Q9NTK5 396 aaKnown RBP8.55□□□□□ -1.04
SNHG17-204ENST00000423536 KLHL11Q9NVR0 708 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 NCKIPSDQ9NZQ3 722 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 TFIP11Q9UBB9 837 aaKnown RBP8.55□□□□□ -1.04
SNHG17-204ENST00000423536 IPO11Q9UI26 975 aaKnown RBP8.55□□□□□ -1.04
SNHG17-204ENST00000423536 SRPK3Q9UPE1 567 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 SSUH2Q9Y2M2 353 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 PCDHGA8Q9Y5G5 932 aa8.55□□□□□ -1.04
SNHG17-204ENST00000423536 PTPRQQ9UMZ3 2332 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 COL6A6A6NMZ7 2263 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 EDDM13A0A1B0GTR0 161 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 BLACEA4D250 179 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 EFSO43281 561 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 HOXD9P28356 352 aaPredicted RBP8.54□□□□□ -1.04
SNHG17-204ENST00000423536 KIF11P52732 1056 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 AP3M2P53677 418 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 YWHAGP61981 247 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNHG17-204ENST00000423536 CYP24A1Q07973 514 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 KCNMA1Q12791 1236 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 NCOA4Q13772 614 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 IGFBP7Q16270 282 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 HNRNPA1L2Q32P51 320 aaKnown RBP8.54□□□□□ -1.04
SNHG17-204ENST00000423536 ADGRF1Q5T601 910 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 CLEC20AQ6ZU45 233 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 GPRIN1Q7Z2K8 1008 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 CCDC186Q7Z3E2 898 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 DSG4Q86SJ6 1040 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 SCD5Q86SK9 330 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 MFN1Q8IWA4 741 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 CARNMT1Q8N4J0 409 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 FAM26EQ8N5C1 309 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 XXYLT1Q8NBI6 393 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 ZNF516Q92618 1163 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 DNAJC19Q96DA6 116 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 P2RY11Q96G91 374 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 EPSTI1Q96J88 318 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 SPATA32Q96LK8 384 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 HEXIM2Q96MH2 286 aaKnown RBP8.54□□□□□ -1.04
SNHG17-204ENST00000423536 DDX50Q9BQ39 737 aaKnown RBP8.54□□□□□ -1.04
SNHG17-204ENST00000423536 PNPLA8Q9NP80 782 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 UCKL1Q9NWZ5 548 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 KCNK4Q9NYG8 393 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 NLGN3Q9NZ94 848 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 SERGEFQ9UGK8 458 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 ATXN7L1Q9ULK2 861 aaPredicted RBP8.54□□□□□ -1.04
SNHG17-204ENST00000423536 MAN2B2Q9Y2E5 1009 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 CLIC4Q9Y696 253 aa8.54□□□□□ -1.04
SNHG17-204ENST00000423536 MORC2Q9Y6X9 1032 aaPredicted RBP8.54□□□□□ -1.04
SNHG17-204ENST00000423536 CCDC187A0A096LP49 1063 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 SCAMP1O15126 338 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 SLC31A1O15431 190 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 EXOC3O60645 756 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 RNGTTO60942 597 aaKnown RBP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 ITGB6P18564 788 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 TGM2P21980 687 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 CD70P32970 193 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 MLLT3P42568 568 aaPredicted RBP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 RPIAP49247 311 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 SLC11A2P49281 568 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 ADPRHP54922 357 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 HNRNPKP61978 463 aaKnown RBP eCLIP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 CEBPZQ03701 1054 aaKnown RBP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 CCDC15Q0P6D6 951 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 ZNF177Q13360 481 aaPredicted RBP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 SLC39A14Q15043 492 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 STK38Q15208 465 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 TBR1Q16650 682 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 CDKN3Q16667 212 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 ACCSLQ4AC99 568 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 C9orf64Q5T6V5 341 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 FAM46CQ5VWP2 391 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 CCDC73Q6ZRK6 1079 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 EFL1Q7Z2Z2 1120 aaKnown RBP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 KIAA0907Q7Z7F0 614 aaPredicted RBP8.53□□□□□ -1.04
SNHG17-204ENST00000423536 STK40Q8N2I9 435 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 FBXO39Q8N4B4 442 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 LINC00301Q8NCQ3 95 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 NT5C1AQ9BXI3 368 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 DUSP16Q9BY84 665 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 DNAJC28Q9NX36 388 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 CYTH4Q9UIA0 394 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 ERVW-1Q9UQF0 538 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 ENTPD2Q9Y5L3 495 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
SNHG17-204ENST00000423536 KNL1Q8NG31 2342 aa8.52□□□□□ -1.05
SNHG17-204ENST00000423536 CDRT15L2A8MXV6 281 aa8.52□□□□□ -1.05
SNHG17-204ENST00000423536 TTC34A8MYJ7 566 aa8.52□□□□□ -1.05
SNHG17-204ENST00000423536 HHLA1C9JL84 531 aa8.52□□□□□ -1.05
SNHG17-204ENST00000423536 H3BM21 787 aa8.52□□□□□ -1.05
SNHG17-204ENST00000423536 TMX2-CTNND1H3BSU7 103 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms