RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HHATLQ9HCP6 504 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 RGPD3A6NKT7 1758 aaPredicted RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 RGPD4Q7Z3J3 1758 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 MYH9P35579 1960 aaKnown RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 PDS5AQ29RF7 1337 aaKnown RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 MYH4Q9Y623 1939 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 FCHO1O14526 889 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 TFECO14948 347 aaPredicted RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 AKAP3O75969 853 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 TNFSF15O95150 251 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 ERBB2P04626 1255 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 CD1EP15812 388 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 TNFAIP3P21580 790 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 CD82P27701 267 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 NTSR1P30989 418 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 SCNN1GP51170 649 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 RAB15P59190 212 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 PTK2Q05397 1052 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 TUSC3Q13454 348 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 RUNX3Q13761 415 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 UBAP2LQ14157 1087 aaKnown RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 DUOXA2Q1HG44 320 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 SGSM1Q2NKQ1 1148 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 LRRC24Q50LG9 513 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM207Q6UWW9 146 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 INTS8Q75QN2 995 aaKnown RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 PEG10Q86TG7 708 aaKnown RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM139Q8IV31 216 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 CCDC185Q8N715 623 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 DNAJC5GQ8N7S2 189 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 CCNYQ8ND76 341 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 PHC3Q8NDX5 983 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 LMBR1Q8WVP7 490 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 FBXW5Q969U6 566 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 ADAD1Q96M93 576 aaKnown RBP3.65□□□□□ -1.83
TOP2A-201ENST00000423485 SLC6A16Q9GZN6 736 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 CDT1Q9H211 546 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 ACAD8Q9UKU7 415 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 PKP3Q9Y446 797 aa3.65□□□□□ -1.83
TOP2A-201ENST00000423485 LINC01553A4QN01 128 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CCDC151A5D8V7 595 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 RNF212BA8MTL3 300 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 KCNK3O14649 394 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SCAMP1O15126 338 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CBFA2T2O43439 604 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 VIPR1P32241 457 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 RABIFP47224 123 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PEX3P56589 373 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 OCRLQ01968 901 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PCDH1Q08174 1060 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 TXNDC8Q6A555 127 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 TTI2Q6NXR4 508 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SCARA5Q6ZMJ2 495 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MMS22LQ6ZRQ5 1243 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 C11orf57Q6ZUT1 292 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 TECPR1Q7Z6L1 1165 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 NAXDQ8IW45 347 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 AGBL5Q8NDL9 886 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 NUP37Q8NFH4 326 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SNX33Q8WV41 574 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 FATE1Q969F0 183 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ZBED3Q96IU2 234 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ARL5BQ96KC2 179 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 NT5C1BQ96P26 610 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 FAM83CQ9BQN1 747 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 LLPHQ9BRT6 129 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CNPY3Q9BT09 278 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ANKRD6Q9Y2G4 727 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 HEBP2Q9Y5Z4 205 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PHIPQ8WWQ0 1821 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 LOXHD1Q8IVV2 1947 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MAP2K7O14733 419 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 KCNK5O95279 499 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 BCL10O95999 233 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PLA2G4BP0C869 781 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 UQCRBP14927 111 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 AOC1P19801 751 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 MSH3P20585 1137 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PAICSP22234 425 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 CCR1P32246 355 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 SLC6A11P48066 632 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 NLRP12P59046 1061 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 IRX1P78414 480 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ANK2Q01484 3957 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 KLRB1Q12918 225 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 KRT31Q15323 416 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 INTS6LQ5JSJ4 861 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ANKRD40Q6AI12 368 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 HPS6Q86YV9 775 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM151BQ8IW70 566 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 BLIDQ8IZY5 108 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 FAM46DQ8NEK8 389 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 OR5M3Q8NGP4 307 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ENOX1Q8TC92 643 aaKnown RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 KLHL6Q8WZ60 621 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 PPP1R2P1Q96PQ5 205 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 C16orf70Q9BSU1 422 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 FSD1LQ9BXM9 530 aa3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF717Q9BY31 904 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-201ENST00000423485 ZCWPW1Q9H0M4 648 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms