RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 FAM72DQ6L9T8 149 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 FAM72BQ86X60 149 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 ZC3H7BQ9UGR2 993 aaKnown RBP23.69■■□□□ 1.38
LSM8-203ENST00000422760 ADAM28Q9UKQ2 775 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 OGDHLQ9ULD0 1010 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 TNFRSF10BO14763 440 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 SYN3O14994 580 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 DGKIO75912 1065 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 CCNFP41002 786 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 MAGEA3P43357 314 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 ARL13BQ3SXY8 428 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 HEATR6Q6AI08 1181 aaKnown RBP23.69■■□□□ 1.38
LSM8-203ENST00000422760 CLNKQ7Z7G1 428 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 VPS52Q8N1B4 723 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 DQX1Q8TE96 717 aaKnown RBP23.69■■□□□ 1.38
LSM8-203ENST00000422760 SCLYQ96I15 445 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 TRIM62Q9BVG3 475 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 RNF208Q9H0X6 261 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 HCSTQ9UBK5 93 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 TTLL3Q9Y4R7 772 aa23.69■■□□□ 1.38
LSM8-203ENST00000422760 HACD1B0YJ81 288 aa23.68■■□□□ 1.38
LSM8-203ENST00000422760 COPEO14579 308 aa23.68■■□□□ 1.38
LSM8-203ENST00000422760 CXCR3P49682 368 aa23.68■■□□□ 1.38
LSM8-203ENST00000422760 KRT72Q14CN4 511 aa23.68■■□□□ 1.38
LSM8-203ENST00000422760 PRKD1Q15139 912 aaPredicted RBP23.68■■□□□ 1.38
LSM8-203ENST00000422760 ATG16L1Q676U5 607 aa23.68■■□□□ 1.38
LSM8-203ENST00000422760 DCP1BQ8IZD4 617 aaKnown RBP23.68■■□□□ 1.38
LSM8-203ENST00000422760 TFB1MQ8WVM0 346 aaKnown RBP23.68■■□□□ 1.38
LSM8-203ENST00000422760 NPHS2Q9NP85 383 aa23.68■■□□□ 1.38
LSM8-203ENST00000422760 LRFN2Q9ULH4 789 aa23.68■■□□□ 1.38
LSM8-203ENST00000422760 FNDC1Q4ZHG4 1894 aaPredicted RBP23.67■■□□□ 1.38
LSM8-203ENST00000422760 CCL5P13501 91 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 VAV1P15498 845 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 ATN1P54259 1190 aaPredicted RBP23.67■■□□□ 1.38
LSM8-203ENST00000422760 FAAP100Q0VG06 881 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 IGDCC3Q8IVU1 814 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 SCN4BQ8IWT1 228 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 SLC7A6OSQ96CW6 309 aaPredicted RBP23.67■■□□□ 1.38
LSM8-203ENST00000422760 LGMNQ99538 433 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 WDCPQ9H6R7 721 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 DCLK1O15075 740 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 CCDC22O60826 627 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 APOEP02649 317 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 T-ENOLP0DO92 83 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 MLNP12872 115 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 TARSP26639 723 aaKnown RBP23.67■■□□□ 1.38
LSM8-203ENST00000422760 ARFIP2P53365 341 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 TPI1P60174 286 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 PAFAH1B3Q15102 231 aaKnown RBP23.67■■□□□ 1.38
LSM8-203ENST00000422760 FAM171A1Q5VUB5 890 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 BEND5Q7L4P6 421 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 CCNJLQ8IV13 435 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 NETO2Q8NC67 525 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 HTR3CQ8WXA8 447 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 STAMBPL1Q96FJ0 436 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 TKTL2Q9H0I9 626 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 MARCH5Q9NX47 278 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 SLC17A7Q9P2U7 560 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 HAO1Q9UJM8 370 aa23.67■■□□□ 1.38
LSM8-203ENST00000422760 PLXNA3P51805 1871 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.66■■□□□ 1.38
LSM8-203ENST00000422760 C1QAP02745 245 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 NAB1Q13506 487 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 NFE2Q16621 373 aaPredicted RBP23.66■■□□□ 1.38
LSM8-203ENST00000422760 TAF1BQ53T94 588 aaPredicted RBP23.66■■□□□ 1.38
LSM8-203ENST00000422760 STXBP5Q5T5C0 1151 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 CRIPAKQ8N1N5 446 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 UTP4Q969X6 686 aaKnown RBP23.66■■□□□ 1.38
LSM8-203ENST00000422760 FUBP3Q96I24 572 aaKnown RBP eCLIP23.66■■□□□ 1.38
LSM8-203ENST00000422760 B3GALT6Q96L58 329 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 C7orf26Q96N11 449 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 FERMT1Q9BQL6 677 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 GPR62Q9BZJ7 368 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 HIPK3Q9H422 1215 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 NR2E3Q9Y5X4 410 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 MICAL3Q7RTP6 2002 aa23.66■■□□□ 1.38
LSM8-203ENST00000422760 HAUS5O94927 633 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 IGLV3-25P01717 112 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 APRTP07741 180 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 SERPINB4P48594 390 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 SLC11A1P49279 550 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 CTXN3Q4LDR2 81 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 NPAS4Q8IUM7 802 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 MAB21L3Q8N8X9 362 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 GSDMBQ8TAX9 411 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 SERAC1Q96JX3 654 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 TBC1D10AQ9BXI6 508 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 RNPEPL1Q9HAU8 725 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 TRIM33Q9UPN9 1127 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 METTL18O95568 372 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 PYGBP11216 843 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 NEFHP12036 1026 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 ERCC2P18074 760 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 FDFT1P37268 417 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 PGFP49763 221 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 CCL23P55773 120 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 CTC1Q2NKJ3 1217 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 ZNF280DQ6N043 979 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 TIFABQ6ZNK6 161 aa23.65■■□□□ 1.38
LSM8-203ENST00000422760 CAND1Q86VP6 1230 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms