RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SGK1O00141 431 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ZBTB24O43167 697 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 CREB3O43889 395 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 RHOCP08134 193 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 SP9P0CG40 484 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 OR1E1P30953 314 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 CSKP41240 450 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 TCF15Q12870 199 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 C5orf22Q49AR2 442 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 FNDC3BQ53EP0 1204 aaKnown RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ALFQ53S48 1182 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ERMARDQ5T6L9 678 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 DAB2IPQ5VWQ8 1189 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 TMEM215Q68D42 235 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 RNF43Q68DV7 783 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 HEATR6Q6AI08 1181 aaKnown RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ADIPOR2Q86V24 386 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ZNF683Q8IZ20 524 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 MAML2Q8IZL2 1156 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 PYROXD2Q8N2H3 581 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 SLC35G2Q8TBE7 412 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 TBC1D31Q96DN5 1066 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ERLEC1Q96DZ1 483 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 HHIPQ96QV1 700 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ACOX2Q99424 681 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 MUC3BQ9H195 1237 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 DHX35Q9H5Z1 703 aaKnown RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 ZWILCHQ9H900 591 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 PRMT8Q9NR22 394 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 GPATCH2LQ9NWQ4 482 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 CACNA2D2Q9NY47 1150 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 PPARGC1AQ9UBK2 798 aaKnown RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 USP18Q9UMW8 372 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 EPN1Q9Y6I3 576 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-202ENST00000421712 FAM72CH0Y354 149 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 LRIG2O94898 1065 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 HOXB2P14652 356 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 MZF1P28698 734 aaPredicted RBP16.21■□□□□ 0.19
BRAT1-202ENST00000421712 L1CAMP32004 1257 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 NOP2P46087 812 aaKnown RBP16.21■□□□□ 0.19
BRAT1-202ENST00000421712 NRLP54845 237 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 SCAPQ12770 1279 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 SLC12A1Q13621 1099 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 CRY1Q16526 586 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 FUT11Q495W5 492 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 PITRM1Q5JRX3 1037 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 FAM72AQ5TYM5 149 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
BRAT1-202ENST00000421712 FAM72DQ6L9T8 149 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 SERPINA13PQ6UXR4 307 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 KIAA0907Q7Z7F0 614 aaPredicted RBP16.21■□□□□ 0.19
BRAT1-202ENST00000421712 FAM72BQ86X60 149 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 APCDD1Q8J025 514 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 ARFGAP1Q8N6T3 406 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 TSTD1Q8NFU3 115 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 EPAS1Q99814 870 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 POLMQ9NP87 494 aaPredicted RBP16.21■□□□□ 0.19
BRAT1-202ENST00000421712 THAP10Q9P2Z0 257 aaPredicted RBP16.21■□□□□ 0.19
BRAT1-202ENST00000421712 INTUQ9ULD6 942 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 AP4E1Q9UPM8 1137 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 PCDHA13Q9Y5I0 950 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
BRAT1-202ENST00000421712 IGLV3-10A0A075B6K4 115 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 EIF3CLB5ME19 914 aaKnown RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 WASH3PC4AMC7 463 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 NPC1O15118 1278 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 ADAM23O75077 832 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 LRCH4O75427 683 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 ALDH1A2O94788 518 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 NDUFA10O95299 355 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 APBB3O95704 486 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 DLDP09622 509 aaKnown RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 HNRNPLP14866 589 aaKnown RBP eCLIP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 EPHB2P29323 1055 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 PCK1P35558 622 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 PXNP49023 591 aaPredicted RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 DGKEP52429 567 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 GSDMDP57764 484 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 ST8SIA6P61647 398 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 NRG1Q02297 640 aaPredicted RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 ZNF234Q14588 700 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 MESDQ14696 234 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 STARD3Q14849 445 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 HADHQ16836 314 aaKnown RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 PLEKHG6Q3KR16 790 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 C6orf118Q5T5N4 469 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 CXorf57Q6NSI4 855 aaKnown RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 RHOT2Q8IXI1 618 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 PGBD3Q8N328 593 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 ATRIPQ8WXE1 791 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 HSPH1Q92598 858 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 LMLNQ96KR4 655 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 PEBP4Q96S96 227 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 EIF3CQ99613 913 aaKnown RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 SNRNP25Q9BV90 132 aaKnown RBP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 OSGEPQ9NPF4 335 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 BCCIPQ9P287 314 aaKnown RBP eCLIP16.2■□□□□ 0.18
BRAT1-202ENST00000421712 LCMT1Q9UIC8 334 aa16.2■□□□□ 0.18
BRAT1-202ENST00000421712 VPS28Q9UK41 221 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms