RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 REC8O95072 547 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 STAU1O95793 577 aaKnown RBP9.38□□□□□ -0.91
TRIM39-206ENST00000420746 RALAP11233 206 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 POLR2EP19388 210 aaKnown RBP9.38□□□□□ -0.91
TRIM39-206ENST00000420746 ST8SIA6P61647 398 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 TNNC1P63316 161 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 KLRB1Q12918 225 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 NR0B2Q15466 257 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 ZRSR1Q15695 479 aaKnown RBP9.38□□□□□ -0.91
TRIM39-206ENST00000420746 IL17AQ16552 155 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 CDKN3Q16667 212 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 DUOXA2Q1HG44 320 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 C9orf64Q5T6V5 341 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 C1QL3Q5VWW1 255 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 ZNF720Q7Z2F6 126 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 GPBP1Q86WP2 473 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 ZC3H3Q8IXZ2 948 aaKnown RBP9.38□□□□□ -0.91
TRIM39-206ENST00000420746 SRRM1Q8IYB3 904 aaKnown RBP9.38□□□□□ -0.91
TRIM39-206ENST00000420746 FUKQ8N0W3 1084 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 OR5B17Q8NGF7 314 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 TMEM159Q96B96 161 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 SAAL1Q96ER3 474 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 CDK5RAP3Q96JB5 506 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 FAM84AQ96KN4 292 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 SMOQ99835 787 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 MED10Q9BTT4 135 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 STRA6Q9BX79 667 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 NMUR1Q9HB89 426 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 DKK3Q9UBP4 350 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 VPS4AQ9UN37 437 aa9.38□□□□□ -0.91
TRIM39-206ENST00000420746 DNHD1Q96M86 4753 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 A0A1W2PQH9 124 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 CPED1A4D0V7 1026 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 KIAA0391O15091 583 aaKnown RBP9.37□□□□□ -0.91
TRIM39-206ENST00000420746 PLRG1O43660 514 aaKnown RBP9.37□□□□□ -0.91
TRIM39-206ENST00000420746 ASLP04424 464 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 JMJD7P0C870 316 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 CCKBRP32239 447 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 UQCRFS1P47985 274 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 RPIAP49247 311 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 DHX8Q14562 1220 aaKnown RBP9.37□□□□□ -0.91
TRIM39-206ENST00000420746 BMT2Q1RMZ1 405 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 MPP7Q5T2T1 576 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 DCP2Q8IU60 420 aaKnown RBP9.37□□□□□ -0.91
TRIM39-206ENST00000420746 WDR49Q8IV35 697 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 DENND1CQ8IV53 801 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 ZSWIM2Q8NEG5 633 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 ZNF548Q8NEK5 533 aaPredicted RBP9.37□□□□□ -0.91
TRIM39-206ENST00000420746 TTC17Q96AE7 1141 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 PLD4Q96BZ4 506 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
TRIM39-206ENST00000420746 IRX2Q9BZI1 471 aaPredicted RBP9.37□□□□□ -0.91
TRIM39-206ENST00000420746 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 NUDT5Q9UKK9 219 aa9.37□□□□□ -0.91
TRIM39-206ENST00000420746 ITIH6Q6UXX5 1313 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 EDDM13A0A1B0GTR0 161 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 VWA3AA6NCI4 1184 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 H3BM21 787 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 BEST1O76090 585 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 LATS1O95835 1130 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 PRKCGP05129 697 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 KRT7P08729 469 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 RNF224P0DH78 156 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 MZF1P28698 734 aaPredicted RBP9.36□□□□□ -0.91
TRIM39-206ENST00000420746 MAT2AP31153 395 aaKnown RBP9.36□□□□□ -0.91
TRIM39-206ENST00000420746 DRD3P35462 400 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 PSMD8P48556 350 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 MAP3K7CLP57077 242 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 ANKRD1Q15327 319 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 WDR72Q3MJ13 1102 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 LACTB2Q53H82 288 aaPredicted RBP9.36□□□□□ -0.91
TRIM39-206ENST00000420746 PERM1Q5SV97 790 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 TRAPPC11Q7Z392 1133 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 CCDC186Q7Z3E2 898 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 ZC3H18Q86VM9 953 aaKnown RBP9.36□□□□□ -0.91
TRIM39-206ENST00000420746 HEATR4Q86WZ0 1026 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 SLC34A3Q8N130 599 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 GPBAR1Q8TDU6 330 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 GLMNQ92990 594 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 FAM129BQ96TA1 746 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 BOCQ9BWV1 1114 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 IKZF4Q9H2S9 585 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 ZHX3Q9H4I2 956 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 MTG2Q9H4K7 406 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 EPB41L5Q9HCM4 733 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 PREBQ9HCU5 417 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 ZNF71Q9NQZ8 489 aaPredicted RBP9.36□□□□□ -0.91
TRIM39-206ENST00000420746 GPR27Q9NS67 375 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 SEL1LQ9UBV2 794 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 NAGPAQ9UK23 515 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
TRIM39-206ENST00000420746 APCP25054 2843 aa9.35□□□□□ -0.91
TRIM39-206ENST00000420746 HHLA1C9JL84 531 aa9.35□□□□□ -0.91
TRIM39-206ENST00000420746 D6RAR5 112 aa9.35□□□□□ -0.91
TRIM39-206ENST00000420746 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
TRIM39-206ENST00000420746 SEMA7AO75326 666 aa9.35□□□□□ -0.91
TRIM39-206ENST00000420746 NEBLO76041 1014 aa9.35□□□□□ -0.91
TRIM39-206ENST00000420746 CSF2P04141 144 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms