RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 OR52L2PQ8NGH6 319 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAR2Q96K12 515 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 PRPF18Q99633 342 aaKnown RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 PAIP2Q9BPZ3 127 aaKnown RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 TRIM2Q9C040 744 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 NUAK2Q9H093 628 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 HIPK2Q9H2X6 1198 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 AS3MTQ9HBK9 375 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 TMEM8AQ9HCN3 771 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 VPS45Q9NRW7 570 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 PROCRQ9UNN8 238 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 JRKLQ9Y4A0 524 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 DTNAQ9Y4J8 743 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 SIRT4Q9Y6E7 314 aaPredicted RBP3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 KANK1Q14678 1352 aa3.74□□□□□ -1.81
SDCBPP3-201ENST00000419629 CC2D2AQ9P2K1 1620 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 RTEL1-TNFRSF6BF6WH68 1400 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 J3KTA2 159 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 CBFA2T3O75081 653 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 NTSR2O95665 410 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 IVLP07476 585 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 NPPBP16860 134 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 HNRNPH2P55795 449 aaKnown RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 POLE2P56282 527 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 RAE1P78406 368 aaKnown RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 TNFAIP2Q03169 654 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 SRSF1Q07955 248 aaKnown RBP eCLIP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 NCBP1Q09161 790 aaKnown RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 TMTC4Q5T4D3 741 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 DAB2IPQ5VWQ8 1189 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 XRRA1Q6P2D8 792 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 RINLQ6ZS11 566 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM43BQ6ZT52 329 aaPredicted RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 SUGP1Q8IWZ8 645 aaKnown RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 UEVLDQ8IX04 471 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 RBMXL3Q8N7X1 1067 aaKnown RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 KIF18AQ8NI77 898 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 AKAP1Q92667 903 aaKnown RBP eCLIP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 LTV1Q96GA3 475 aaPredicted RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 SENP7Q9BQF6 1050 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 TTLL2Q9BWV7 592 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 TSPY26PQ9H489 355 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 CXorf56Q9H5V9 222 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 SAP30LQ9HAJ7 183 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 ABHD10Q9NUJ1 306 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 VPS4AQ9UN37 437 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 PCDHB2Q9Y5E7 798 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 HEMK1Q9Y5R4 338 aaPredicted RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 CLASP1Q7Z460 1538 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 CAMSAP2Q08AD1 1489 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 RPRD2Q5VT52 1461 aaKnown RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 SCAF11Q99590 1463 aaKnown RBP3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 FYCO1Q9BQS8 1478 aa3.73□□□□□ -1.81
SDCBPP3-201ENST00000419629 THOC2Q8NI27 1593 aaKnown RBP3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 NAIPQ13075 1403 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 FGD6Q6ZV73 1430 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 EPRSP07814 1512 aaKnown RBP3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 B4DGG1 531 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 KIF2AO00139 706 aaPredicted RBP3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 NPC1O15118 1278 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 SKAP2O75563 359 aaPredicted RBP3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 BAG4O95429 457 aaKnown RBP3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 PSG1P11464 419 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 SLC8A1P32418 973 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 MAP2K2P36507 400 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ME1P48163 572 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 VPS41P49754 854 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 SLC14A1Q13336 389 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 FHL3Q13643 280 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ERV3-1Q14264 604 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 KPNB1Q14974 876 aaKnown RBP3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZRSR1Q15695 479 aaKnown RBP3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 C20orf194Q5TEA3 1177 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ACSM6Q6P461 480 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 C1orf228Q6PIY5 440 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 COLCA1Q6ZS62 124 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 CCDC112Q8NEF3 446 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ANKRD20A12PQ8NF67 263 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 GOLGA5Q8TBA6 731 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 TBC1D22AQ8WUA7 517 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 GLMPQ8WWB7 406 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 PPM1EQ8WY54 764 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ITFG2Q969R8 447 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 SIGLEC11Q96RL6 698 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM107BQ9H098 131 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 FAM234AQ9H0X4 552 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 FNIP2Q9P278 1114 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 PCDHB7Q9Y5E2 793 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 HS3ST3B1Q9Y662 390 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ANKRD36BQ8N2N9 1353 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 PARD3Q8TEW0 1356 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ZMYM2Q9UBW7 1377 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 TEX14Q8IWB6 1497 aa3.72□□□□□ -1.81
SDCBPP3-201ENST00000419629 ABHD14A-ACY1A0A1B0GW23 586 aa3.71□□□□□ -1.82
SDCBPP3-201ENST00000419629 H0YHG0 523 aa3.71□□□□□ -1.82
SDCBPP3-201ENST00000419629 PIP5K1BO14986 540 aa3.71□□□□□ -1.82
SDCBPP3-201ENST00000419629 CTAGE5O15320 804 aa3.71□□□□□ -1.82
SDCBPP3-201ENST00000419629 INPPL1O15357 1258 aa3.71□□□□□ -1.82
SDCBPP3-201ENST00000419629 ATP8B1O43520 1251 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms