RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ADAD1Q96M93 576 aaKnown RBP4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 TRAPPC9Q96Q05 1148 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 TMEM79Q9BSE2 394 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 HDHD5Q9BXW7 423 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 SFXN1Q9H9B4 322 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 ERVK-5Q9HDB9 667 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 PAPOLBQ9NRJ5 636 aaKnown RBP4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 AGO2Q9UKV8 859 aaKnown RBP4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 COMMD10Q9Y6G5 202 aa4.99□□□□□ -1.61
HMGB1P49-201ENST00000418882 HMX3A6NHT5 357 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 A6NNC1 897 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 GRM8O00222 908 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 SOCS2O14508 198 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 NBNO60934 754 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 ATG13O75143 517 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 PTGER1P34995 402 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 SMTNL2Q2TAL5 461 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 CCDC117Q8IWD4 279 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 FAM110DQ8TAY7 271 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 KAT2BQ92831 832 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 HERC2P3Q9BVR0 1158 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 TMEM120AQ9BXJ8 343 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 FOXP1Q9H334 677 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 THSD1Q9NS62 852 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 COG5Q9UP83 839 aa4.98□□□□□ -1.61
HMGB1P49-201ENST00000418882 KIR2DS5A0A0G2JLQ3 304 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 F8W810 466 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 KIR2DS3K7RE56 304 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 PRPH2P23942 346 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 CST5P28325 142 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 ADPRHP54922 357 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 DCTN1Q14203 1278 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 RPS6KA2Q15349 733 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 NUGGCQ68CJ6 796 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 DGAT2L7PQ6IED9 249 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 TMEM88Q6PEY1 159 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 SYNE3Q6ZMZ3 975 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 SYT13Q7L8C5 426 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 RNF144BQ7Z419 303 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 DDIASQ8IXT1 998 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 ADPRHL1Q8NDY3 354 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 FCRL4Q96PJ5 515 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 NPAS1Q99742 590 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 PDE11AQ9HCR9 933 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 SPAG4Q9NPE6 437 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 SLC22A11Q9NSA0 550 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 PCDHA12Q9UN75 941 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 PKP3Q9Y446 797 aa4.97□□□□□ -1.61
HMGB1P49-201ENST00000418882 NPIPB13A6NJU9 1138 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 NPIPB5A8MRT5 1133 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 EFCAB8A8MWE9 144 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 NPIPB4C9JG80 1138 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 MCIDASD6RGH6 385 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 TCEA3O75764 348 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 NEURL1O76050 574 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 ACP5P13686 325 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 POLE2P56282 527 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 CDK18Q07002 472 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 OS9Q13438 667 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 CUL4BQ13620 913 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 LEXMQ3ZCV2 418 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 PIK3CD-AS1Q5SR53 167 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 MRPL10Q7Z7H8 261 aaKnown RBP4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 ARFGAP1Q8N6T3 406 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 CPT1BQ92523 772 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 VCPIP1Q96JH7 1222 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 TRMOQ9BU70 441 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 TUBB6Q9BUF5 446 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 SEMA4BQ9NPR2 832 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 LAMP3Q9UQV4 416 aa4.96□□□□□ -1.62
HMGB1P49-201ENST00000418882 B9A039 149 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 RHODO00212 210 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 PIP5K1CO60331 668 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 FAM155BO75949 473 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 EPN2O95208 641 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 CSF1P09603 554 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 CHRNB1P11230 501 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 PSG1P11464 419 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 AVPR2P30518 371 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 LINC00205P59089 165 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 RHAGQ02094 409 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 SEMA3AQ14563 771 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 SMAD1Q15797 465 aaKnown RBP4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 AWAT2Q6E213 333 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 MTFR2Q6P444 385 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 SLC30A9Q6PML9 568 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 LRIG3Q6UXM1 1119 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 TECPR1Q7Z6L1 1165 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 TMEM200AQ86VY9 491 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 GPSM1Q86YR5 675 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 MMP21Q8N119 569 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 NKAPQ8N5F7 415 aaKnown RBP4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 TMEM217Q8N7C4 229 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 FAM47BQ8NA70 645 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 SLC44A5Q8NCS7 719 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 ARRDC3Q96B67 414 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 ZBTB9Q96C00 473 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 CAMK1GQ96NX5 476 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms