RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TK2O00142 265 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 OPHN1O60890 802 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 PEX2P28328 305 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 GRM5P41594 1212 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 DSG1Q02413 1049 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 TRIP10Q15642 601 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 OSTM1Q86WC4 334 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 OR6J1Q8NGC5 347 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 ZNF483Q8TF39 744 aaPredicted RBP12.19□□□□□ -0.46
LIMK1-202ENST00000418310 KCNK16Q96T55 309 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
LIMK1-202ENST00000418310 ANLNQ9NQW6 1124 aa12.19□□□□□ -0.46
LIMK1-202ENST00000418310 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
LIMK1-202ENST00000418310 MEIS3P2A8K0S8 358 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 NRP1O14786 923 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SERPINE1P05121 402 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 POLBP06746 335 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 EPHA3P29320 983 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ACTR3P61158 418 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 WASHC5Q12768 1159 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 EFHC1Q5JVL4 640 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 USP13Q92995 863 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SNX27Q96L92 541 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 OR52B2Q96RD2 323 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SORT1Q99523 831 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SIK2Q9H0K1 926 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ATXN3LQ9H3M9 355 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 C20orf96Q9NUD7 363 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SPATS2LQ9NUQ6 558 aaKnown RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ZNF212Q9UDV6 495 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 A0A096LPK6 155 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ZBTB24O43167 697 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ZBTB14O43829 449 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 HUS1O60921 280 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ZFXP17010 805 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ERCC2P18074 760 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 PGAM1P18669 254 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 MPSTP25325 297 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 FOXB2Q5VYV0 432 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 WSCD1Q658N2 575 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 TMEM198Q66K66 360 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SLC27A1Q6PCB7 646 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 NET1Q7Z628 596 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 GPC2Q8N158 579 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SNX31Q8N9S9 440 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 GBP5Q96PP8 586 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 MMADHCQ9H3L0 296 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 FZD10Q9ULW2 581 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 SMIM28A0A1B0GU29 152 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ASB14A6NK59 587 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ARSAP15289 507 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 RAP1GDS1P52306 607 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ABCE1P61221 599 aaKnown RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 NIPAL4Q0D2K0 466 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 TUBB3Q13509 450 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 FAM187BQ17R55 369 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 FSTL4Q6MZW2 842 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 KYAT3Q6YP21 454 aaKnown RBP12.18□□□□□ -0.46
LIMK1-202ENST00000418310 RNF34Q969K3 372 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 ECSITQ9BQ95 431 aa12.18□□□□□ -0.46
LIMK1-202ENST00000418310 PRKCGP05129 697 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 USP17L7P0C7H9 530 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 CYP2C9P11712 490 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 NCAM1P13591 858 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 SMPD1P17405 629 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 CPOXP36551 454 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 MATKP42679 507 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 PTPN9P43378 593 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 AFF1P51825 1210 aaKnown RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 TKTL1P51854 596 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 PKNOX1P55347 436 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 TBL3Q12788 808 aaKnown RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 RASIP1Q5U651 963 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 LRRC8BQ6P9F7 803 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 RNF111Q6ZNA4 994 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 MARK2Q7KZI7 788 aaKnown RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 OMDQ99983 421 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 GCOM2Q9BZD3 368 aaPredicted RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 NUF2Q9BZD4 464 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 ULBP1Q9BZM6 244 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 TASP1Q9H6P5 420 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 DDIT4Q9NX09 232 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 VANGL2Q9ULK5 521 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 RAG1P15918 1043 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 GP5P40197 560 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 NR2C2P49116 596 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 NUDT2P50583 147 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 AQP4P55087 323 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 TPI1P60174 286 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 GRIK3Q13003 919 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 PDCD2Q16342 344 aaPredicted RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 SFT2D3Q587I9 215 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 RWDD4Q6NW29 188 aaKnown RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 NPWQ8N729 165 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 CCNYL1Q8N7R7 359 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms