RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	TBC1D13	Q9NVG8	400 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	TMEM161A	Q9NX61	479 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	CACNG4	Q9UBN1	327 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ZNF212	Q9UDV6	495 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	TRHDE	Q9UKU6	1024 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	IFT172	Q9UG01	1749 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212		M0R2N6	131 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	KPNA3	O00505	521 aa	Predicted RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	LRCH4	O75427	683 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ARL2	P36404	184 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	RABGGTB	P53611	331 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	NOG	Q13253	232 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	FOXR2	Q6PJQ5	311 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	OTOA	Q7RTW8	1153 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ACOX2	Q99424	681 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	SH3GL2	Q99962	352 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	RMI1	Q9H9A7	625 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	APOBEC3G	Q9HC16	384 aa	Known RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	SYTL2	Q9HCH5	934 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	TCF7L2	Q9NQB0	619 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	KAT6A	Q92794	2004 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	CASZ1	Q86V15	1759 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	CCDC189	A1A4V9	331 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	MSI1	O43347	362 aa	Known RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	DDHD2	O94830	711 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	RBP1	P09455	135 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	MMP13	P45452	471 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	TMED1	Q13445	227 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	NR6A1	Q15406	480 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ZNF284	Q2VY69	593 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	PPP4R4	Q6NUP7	873 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	PKN3	Q6P5Z2	889 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	FAM35A	Q86V20	835 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	RAB42	Q8N4Z0	105 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ALLC	Q8N6M5	410 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	LRRC52	Q8N7C0	313 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	TDRD5	Q8NAT2	981 aa	Known RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	C17orf80	Q9BSJ5	609 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	CDHR5	Q9HBB8	845 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	PADI3	Q9ULW8	664 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	DOLK	Q9UPQ8	538 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	FOXO6	A8MYZ6	492 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	HDC	P19113	662 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	MATK	P42679	507 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ITGA7	Q13683	1181 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	AARS2	Q5JTZ9	985 aa	Known RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	C9orf57	Q5W0N0	161 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	PMF1	Q6P1K2	205 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ZNF662	Q6ZS27	426 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	TMEM192	Q8IY95	271 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	MYO1H	Q8N1T3	1032 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	MTMR14	Q8NCE2	650 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	ZNF483	Q8TF39	744 aa	Predicted RBP	13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	APOPT1	Q96IL0	206 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	GID8	Q9NWU2	228 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	PLK2	Q9NYY3	685 aa		13.49	□□□□□ -0.25
BDNF-208	ENST00000418212	EME2	A4GXA9	379 aa	Predicted RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	EVPLL	A8MZ36	301 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	NR5A2	O00482	541 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	ASGR1	P07306	291 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SOAT1	P35610	550 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	CD86	P42081	329 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	HDAC4	P56524	1084 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	ZNF280A	P59817	542 aa	Predicted RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	DYNC1I2	Q13409	638 aa	Known RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	PARP6	Q2NL67	630 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	POM121L1P	Q3SYA9	428 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SETD3	Q86TU7	594 aa	Predicted RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	DEFB107A	Q8IZN7	70 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	AGAP11	Q8TF27	550 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	MAML3	Q96JK9	1138 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	UBA2	Q9UBT2	640 aa	Predicted RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	CDH9	Q9ULB4	789 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	MDM4	O15151	490 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SMPD1	P17405	629 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	PGAM1	P18669	254 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	KCNA3	P22001	575 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	CNTF	P26441	200 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	OR1D2	P34982	312 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SLC1A6	P48664	564 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SP2	Q02086	613 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SPIRE1	Q08AE8	756 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	ITIH4	Q14624	930 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	EXOC3L1	Q86VI1	746 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	NAF1	Q96HR8	494 aa	Known RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	FAXDC2	Q96IV6	333 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	KLHL5	Q96PQ7	755 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	CAPN10	Q9HC96	672 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	DMAC2	Q9NW81	257 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	FAM32A	Q9Y421	112 aa	Known RBP	13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	PLIN4	Q96Q06	1357 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	MAGEB16	A2A368	324 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	C5orf58	C9J3I9	102 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	CD48	P09326	243 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	SPATA31D3	P0C874	917 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	THRA	P10827	490 aa		13.48	□□□□□ -0.25
BDNF-208	ENST00000418212	CCNB1	P14635	433 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms