RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CPQQ9Y646 472 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 MTCH2Q9Y6C9 303 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 COL4A2P08572 1712 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 CCDC195A0A1B0GUA6 201 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 DRGXA6NNA5 263 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 WASH4PA8MWX3 477 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 E9PAM4 449 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 H3BM21 787 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 H3BRJ5 948 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 CCDC188H7C350 402 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 APOC4-APOC2K7ER74 178 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 EEF2KO00418 725 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 SCAMP3O14828 347 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 TP73O15350 636 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 MAN1A2O60476 641 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 CNTN5O94779 1100 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 MOCS2O96007 188 aaPredicted RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 APOC2P02655 101 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 MBL2P11226 248 aaPredicted RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 PTPN2P17706 415 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ERCC2P18074 760 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 TACR2P21452 398 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ECHS1P30084 290 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 CORO1AP31146 461 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 GBP1P32455 592 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 COILP38432 576 aaPredicted RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 PAFAH1B1P43034 410 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 KCNJ1P48048 391 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 FNTAP49354 379 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 NRLP54845 237 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 VCPP55072 806 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 GDF10P55107 478 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 OTUD4Q01804 1114 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 DLX2Q07687 328 aaPredicted RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 USP4Q13107 963 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ADAM15Q13444 863 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 AUHQ13825 339 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 PAFAH1B3Q15102 231 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 TRADDQ15628 312 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ELF2Q15723 593 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 CCNG2Q16589 344 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 PABPC1LQ4VXU2 614 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 ALFQ53S48 1182 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 HABP4Q5JVS0 413 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 TEX35Q5T0J7 233 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 RAP1GAP2Q684P5 730 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 NUGGCQ68CJ6 796 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 RNF43Q68DV7 783 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ANKRD54Q6NXT1 300 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 FBXL22Q6P050 247 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 TMC5Q6UXY8 1006 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 GRASPQ7Z6J2 395 aaPredicted RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 GPR149Q86SP6 731 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 PRUNE1Q86TP1 453 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 MNS1Q8NEH6 495 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ITFG1Q8TB96 612 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 LRRN4Q8WUT4 740 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 SEC14L1Q92503 715 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 SMG7Q92540 1137 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 USP13Q92995 863 aaPredicted RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 PLD4Q96BZ4 506 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 HAUS1Q96CS2 278 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ZNF419Q96HQ0 510 aaPredicted RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 RPGRIP1Q96KN7 1286 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 BTN2A3PQ96KV6 586 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 C1orf74Q96LT6 269 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 LRRC3BQ96PB8 259 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 CDK5RAP1Q96SZ6 601 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 TRIM51Q9BSJ1 452 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 S1PR5Q9H228 398 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 SLITRK6Q9H5Y7 841 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 TRPC7Q9HCX4 862 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 DZANK1Q9NVP4 752 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 DTLQ9NZJ0 730 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 OR12D3Q9UGF7 316 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 PCYOX1Q9UHG3 505 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 AMACRQ9UHK6 382 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 AGO1Q9UL18 857 aaKnown RBP7.05□□□□□ -1.28
CPS1-202ENST00000417946 DNPEPQ9ULA0 475 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 ARHGAP26Q9UNA1 814 aa7.05□□□□□ -1.28
CPS1-202ENST00000417946 KIAA1549LQ6ZVL6 1849 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MYO18AQ92614 2054 aaKnown RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 APOL1O14791 398 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TTI1O43156 1089 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 CREB3O43889 395 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 ACSL4O60488 711 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 XYLBO75191 536 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TJP3O95049 919 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MAP3K6O95382 1288 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 APOEP02649 317 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MYBL2P10244 700 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 SLC2A3P11169 496 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 VAV1P15498 845 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TCF3P15923 654 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TIMP2P16035 220 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 DESP17661 470 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 PFKLP17858 780 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 HDCP19113 662 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms