RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 SOBPA7XYQ1 873 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 G3V3G9 751 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 DPYSL4O14531 572 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 MAFGO15525 162 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 MED7O43513 233 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TBC1D12O60347 775 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 CBFA2T3O75081 653 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TADA2AO75478 443 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 MAP3K6O95382 1288 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 HOXC6P09630 235 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 COL6A2P12110 1019 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 MX2P20592 715 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 CSRP3P50461 194 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 KCNC4Q03721 635 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 PDAP1Q13442 181 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 CYTH1Q15438 398 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TGFBIQ15582 683 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 LSM12Q3MHD2 195 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 PDCD4Q53EL6 469 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 DCAF8Q5TAQ9 597 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 DCLRE1AQ6PJP8 1040 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 SCARA5Q6ZMJ2 495 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 RNF168Q8IYW5 571 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 FIBCD1Q8N539 461 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TRIML2Q8N7C3 387 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TDRD5Q8NAT2 981 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 DEPTORQ8TB45 409 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ATP2A3Q93084 1043 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 SLCO4A1Q96BD0 722 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 PIWIL1Q96J94 861 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 SLC29A1Q99808 456 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ADPGKQ9BRR6 497 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 GATA5Q9BWX5 397 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 ANKRD60Q9BZ19 345 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ELOVL4Q9GZR5 314 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 WDR55Q9H6Y2 383 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 WDR41Q9HAD4 459 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 PICK1Q9NRD5 415 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 VPS45Q9NRW7 570 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 PNPLA3Q9NST1 481 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 SLC38A7Q9NVC3 462 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 GPATCH2LQ9NWQ4 482 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TCEAL9Q9UHQ7 104 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 IPO11Q9UI26 975 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 PAIP2BQ9ULR5 123 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 FAF1Q9UNN5 650 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 WDR81Q562E7 1941 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TCAF2A6NFQ2 919 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 C9IYK1 514 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 AMHP03971 560 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 P4HA1P13674 534 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 CD19P15391 556 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 NPR1P16066 1061 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 OXCT1P55809 520 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 DUOXA2Q1HG44 320 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 CCDC14Q49A88 953 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ZBED5Q49AG3 693 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 BOLA3Q53S33 107 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 HMBOX1Q6NT76 420 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ZPBP2Q6X784 338 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 CPXCR1Q8N123 301 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TMEM151AQ8N4L1 468 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ZNF513Q8N8E2 541 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 GIPC3Q8TF64 312 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 KHSRPQ92945 711 aaKnown RBP eCLIP8.04□□□□□ -1.121e-6■■■□□ 18
VRK2-203ENST00000417641 USP13Q92995 863 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 ATP6V1E2Q96A05 226 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ISOC1Q96CN7 298 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 VPS50Q96JG6 964 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 QKIQ96PU8 341 aaKnown RBP eCLIP8.04□□□□□ -1.121e-7■■■■■ 31.4
VRK2-203ENST00000417641 DOK1Q99704 481 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 SNX15Q9NRS6 342 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 TUBA8Q9NY65 449 aaPredicted RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 EBF1Q9UH73 591 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 CPSF3Q9UKF6 684 aaKnown RBP8.04□□□□□ -1.12
VRK2-203ENST00000417641 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 MYRFQ9Y2G1 1151 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 HEY1Q9Y5J3 304 aa8.04□□□□□ -1.12
VRK2-203ENST00000417641 ARHGEF37A1IGU5 675 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 LRRIQ4A6NIV6 560 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 TRIM38O00635 465 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 HTRA2O43464 458 aaPredicted RBP8.03□□□□□ -1.12
VRK2-203ENST00000417641 HSPA4LO95757 839 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 SBK3P0C264 359 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 PGAM1P18669 254 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 FUT4P22083 530 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 MPSTP25325 297 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 PPARGP37231 505 aaPredicted RBP8.03□□□□□ -1.12
VRK2-203ENST00000417641 GP5P40197 560 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 RAP1GAPP47736 663 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 ACTR2P61160 394 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 ITGA7Q13683 1181 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 C16orf72Q14CZ0 275 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 ZNF699Q32M78 642 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 KCTD21Q4G0X4 260 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 NHSL2Q5HYW2 709 aa8.03□□□□□ -1.12
VRK2-203ENST00000417641 FAM102AQ5T9C2 384 aaPredicted RBP8.03□□□□□ -1.12
VRK2-203ENST00000417641 IRAK1BP1Q5VVH5 260 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms