RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NAT9Q9BTE0 207 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 MRGBPQ9NV56 204 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 PRKAG2Q9UGJ0 569 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 DAPK2Q9UIK4 370 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 VANGL2Q9ULK5 521 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 KNL1Q8NG31 2342 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 CPSF4O95639 269 aaKnown RBP13.15□□□□□ -0.3
SCN1B-202ENST00000415950 PEX2P28328 305 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 HOXD13P35453 343 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 NEK3P51956 506 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 CHN2P52757 468 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 ZIK1Q3SY52 487 aaPredicted RBP13.15□□□□□ -0.3
SCN1B-202ENST00000415950 TMC7Q7Z402 723 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 SLC9A9Q8IVB4 645 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 UTP15Q8TED0 518 aaKnown RBP13.15□□□□□ -0.3
SCN1B-202ENST00000415950 TRPC4APQ8TEL6 797 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 GPRASP2Q96D09 838 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 FICDQ9BVA6 458 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 ZNF518BQ9C0D4 1074 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 ZNF862O60290 1169 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 PEX10O60683 326 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 VAV1P15498 845 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 ARHGEF7Q14155 803 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 NR6A1Q15406 480 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 LINC00523Q86TU6 105 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 FBXO16Q8IX29 292 aaPredicted RBP13.15□□□□□ -0.3
SCN1B-202ENST00000415950 CASP10Q92851 521 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 B3GNT5Q9BYG0 378 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 ERAP1Q9NZ08 941 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 HES2Q9Y543 173 aa13.15□□□□□ -0.3
SCN1B-202ENST00000415950 ASTN2O75129 1339 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 MAFGO15525 162 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 TNFAIP8O95379 198 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 PSMB4P28070 264 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 TAF6P49848 677 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 SLC9A5Q14940 896 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 MPZL3Q6UWV2 235 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 RNF145Q96MT1 663 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 NMRAL1Q9HBL8 299 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 XPNPEP3Q9NQH7 507 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 ZNRF3Q9ULT6 936 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 ADGRA3Q8IWK6 1321 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 H0YC42 278 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 UGT1A9O60656 530 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 LSM8O95777 96 aaKnown RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 FASP25445 335 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 DGCR6Q14129 220 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 ADRM1Q16186 407 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 PTPN20Q4JDL3 420 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 C4orf22Q6V702 233 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 C2orf69Q8N8R5 385 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF483Q8TF39 744 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 EZH1Q92800 747 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 NDEL1Q9GZM8 345 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 WDR41Q9HAD4 459 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 UGT1A7Q9HAW7 530 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 UGT1A10Q9HAW8 530 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 UGT1A8Q9HAW9 530 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 ZNF839A8K0R7 811 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 VWA5AO00534 786 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 HBP1O60381 514 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 NBNO60934 754 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 AKAP5P24588 427 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 PSMD7P51665 324 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 ALDH6A1Q02252 535 aaKnown RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 WASHC5Q12768 1159 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 PGS1Q32NB8 556 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 LIN52Q52LA3 116 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 CCDC149Q6ZUS6 474 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 FIG4Q92562 907 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 SERAC1Q96JX3 654 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 NOCTQ9UK39 431 aaKnown RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 EIF3LQ9Y262 564 aaKnown RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 SPATA31A5Q5VU36 1347 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 SPATA31A7Q8IWB4 1347 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 TMEM191CA6NGB0 347 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 C9JVG2 144 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 KATNA1O75449 491 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 TOMM70O94826 608 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 GSTM1P09488 218 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 PDK2Q15119 407 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 SV2CQ496J9 727 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 BBS12Q6ZW61 710 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 WDR49Q8IV35 697 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 CENPLQ8N0S6 344 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 MKL1Q969V6 931 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 DGCR6LQ9BY27 220 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 C6orf62Q9GZU0 229 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-202ENST00000415950 EBF3Q9H4W6 596 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 SLC17A6Q9P2U8 582 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 PCDHA2Q9Y5H9 948 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 AP4B1Q9Y6B7 739 aa13.14□□□□□ -0.31
SCN1B-202ENST00000415950 STK25O00506 426 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 COX4I1P13073 169 aa13.13□□□□□ -0.31
SCN1B-202ENST00000415950 ITGB6P18564 788 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms