RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 TJP2Q9UDY2 1190 aa20.01■□□□□ 0.79
UBXN4-202ENST00000415164 CELSR3Q9NYQ7 3312 aa20.01■□□□□ 0.79
UBXN4-202ENST00000415164 EDDM13A0A1B0GTR0 161 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 PLK4O00444 970 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 ENC1O14682 589 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 DFNA5O60443 496 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 LUC7L3O95232 432 aaKnown RBP20■□□□□ 0.79
UBXN4-202ENST00000415164 APOEP02649 317 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 WNT1P04628 370 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 KRT5P13647 590 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 CD38P28907 300 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 DNAJC3Q13217 504 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 C9orf64Q5T6V5 341 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 KLHL10Q6JEL2 608 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 TAC4Q86UU9 113 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 SCUBE3Q8IX30 993 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 STK40Q8N2I9 435 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 PDCD7Q8N8D1 485 aaKnown RBP20■□□□□ 0.79
UBXN4-202ENST00000415164 OR2T34Q8NGX1 318 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 LMLNQ96KR4 655 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 GSDMAQ96QA5 445 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 IRX2Q9BZI1 471 aaPredicted RBP20■□□□□ 0.79
UBXN4-202ENST00000415164 EBF2Q9HAK2 575 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 GDF3Q9NR23 364 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 XPO7Q9UIA9 1087 aaKnown RBP20■□□□□ 0.79
UBXN4-202ENST00000415164 TLR6Q9Y2C9 796 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 PTPRBP23467 1997 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 TMEM131Q92545 1883 aa20■□□□□ 0.79
UBXN4-202ENST00000415164 PSMA7O14818 248 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 IL1BP01584 269 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 JUPP14923 745 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 STK19P49842 368 aaPredicted RBP19.99■□□□□ 0.79
UBXN4-202ENST00000415164 ECT2LQ008S8 904 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 SMAD1Q15797 465 aaKnown RBP19.99■□□□□ 0.79
UBXN4-202ENST00000415164 SND1Q7KZF4 910 aaKnown RBP eCLIP19.99■□□□□ 0.79
UBXN4-202ENST00000415164 CIR1Q86X95 450 aaPredicted RBP19.99■□□□□ 0.79
UBXN4-202ENST00000415164 ARHGEF19Q8IW93 802 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 APCDD1Q8J025 514 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 FMR1NBQ8N0W7 255 aaPredicted RBP19.99■□□□□ 0.79
UBXN4-202ENST00000415164 EID2Q8N6I1 236 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 AZIN2Q96A70 460 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 CRELD1Q96HD1 420 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 SERAC1Q96JX3 654 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 SLCO3A1Q9UIG8 710 aa19.99■□□□□ 0.79
UBXN4-202ENST00000415164 SYNJ2BP-COX16A0A087WUM0 186 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3DA0A087WVF3 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3IA0A087WXS9 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3EA0A087X179 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3KA0A087X1G2 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TARSL2A2RTX5 802 aaKnown RBP19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3FA6NER0 549 aaPredicted RBP19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3LB9A6J9 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 FYNP06241 537 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 SRPRAP08240 638 aaKnown RBP19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3HP0C7X1 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TACR2P21452 398 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 CAMK2BQ13554 666 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 SLC45A4Q5BKX6 768 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 ZC3H12AQ5D1E8 599 aaKnown RBP19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3GQ6DHY5 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3CQ6IPX1 549 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 TBC1D3Q8IZP1 549 aaPredicted RBP19.98■□□□□ 0.79
UBXN4-202ENST00000415164 SCUBE2Q9NQ36 999 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 COX16Q9P0S2 106 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 FZD4Q9ULV1 537 aa19.98■□□□□ 0.79
UBXN4-202ENST00000415164 LOC400499M0QZD8 3231 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 KNL1Q8NG31 2342 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 WNT9AO14904 365 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 SART1O43290 800 aaKnown RBP19.97■□□□□ 0.79
UBXN4-202ENST00000415164 ADH1BP00325 375 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 PDGFRAP16234 1089 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 HNF1BP35680 557 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 NNMTP40261 264 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 KCNJ12Q14500 433 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 COBLL1Q53SF7 1204 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 SYPL2Q5VXT5 272 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 DENND1BQ6P3S1 775 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.97■□□□□ 0.79
UBXN4-202ENST00000415164 AADATQ8N5Z0 425 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 PIP4K2CQ8TBX8 421 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 DKK4Q9UBT3 224 aa19.97■□□□□ 0.79
UBXN4-202ENST00000415164 HOOK1Q9UJC3 728 aaKnown RBP19.97■□□□□ 0.79
UBXN4-202ENST00000415164 APC2O95996 2303 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 F5H5T6 163 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 RFPL3O75679 317 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 C7P10643 843 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 VAV1P15498 845 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 GOT1P17174 413 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 MZF1P28698 734 aaPredicted RBP19.96■□□□□ 0.79
UBXN4-202ENST00000415164 MAT2AP31153 395 aaKnown RBP19.96■□□□□ 0.79
UBXN4-202ENST00000415164 ARRB1P49407 418 aaPredicted RBP19.96■□□□□ 0.79
UBXN4-202ENST00000415164 ADPRHP54922 357 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 SEMG2Q02383 582 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 POM121L1PQ3SYA9 428 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 C6orf118Q5T5N4 469 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 TMPRSS12Q86WS5 348 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 KDM1BQ8NB78 822 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 RNF34Q969K3 372 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 SLC39A13Q96H72 371 aa19.96■□□□□ 0.79
UBXN4-202ENST00000415164 CEP63Q96MT8 703 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms