RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 MX2P20592 715 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 GARSP41250 739 aaKnown RBP15.34■□□□□ 0.05
TTC39A-208ENST00000413473 HARS2P49590 506 aaKnown RBP15.34■□□□□ 0.05
TTC39A-208ENST00000413473 DSG1Q02413 1049 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 PDPK2PQ6A1A2 396 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 STRA8Q7Z7C7 330 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 APLFQ8IW19 511 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-208ENST00000413473 PYDC1Q8WXC3 89 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 ZNF669Q96BR6 464 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-208ENST00000413473 KATNBL1Q9H079 304 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 DDX43Q9NXZ2 648 aaKnown RBP15.34■□□□□ 0.05
TTC39A-208ENST00000413473 KLHL8Q9P2G9 620 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-208ENST00000413473 ASB3Q9Y575 518 aa15.34■□□□□ 0.05
TTC39A-208ENST00000413473 EEF2KO00418 725 aaKnown RBP15.33■□□□□ 0.05
TTC39A-208ENST00000413473 SNAI1O95863 264 aaPredicted RBP15.33■□□□□ 0.05
TTC39A-208ENST00000413473 CD4P01730 458 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 UBTFL6P0CB48 400 aaPredicted RBP15.33■□□□□ 0.05
TTC39A-208ENST00000413473 YY1P25490 414 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 NOS2P35228 1153 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 IRX1P78414 480 aaPredicted RBP15.33■□□□□ 0.05
TTC39A-208ENST00000413473 USP4Q13107 963 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 SPANXN3Q5MJ09 141 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 ZNF483Q8TF39 744 aaPredicted RBP15.33■□□□□ 0.05
TTC39A-208ENST00000413473 NT5C3BQ969T7 300 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 NPY6RQ99463 290 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 AGAP2Q99490 1192 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 TSC22D3Q99576 134 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 ECSITQ9BQ95 431 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 OXCT2Q9BYC2 517 aaPredicted RBP15.33■□□□□ 0.05
TTC39A-208ENST00000413473 PRDM16Q9HAZ2 1276 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 CYP4F11Q9HBI6 524 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 S100A14Q9HCY8 104 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 PIGVQ9NUD9 493 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 GDAP2Q9NXN4 497 aa15.33■□□□□ 0.05
TTC39A-208ENST00000413473 FAM72CH0Y354 149 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 DAB1O75553 588 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 PDE5AO76074 875 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 MMP3P08254 477 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 ALOX15P16050 662 aaPredicted RBP15.33■□□□□ 0.04
TTC39A-208ENST00000413473 SMPD1P17405 629 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 ABCG1P45844 678 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 TAF6P49848 677 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 SOX4Q06945 474 aaPredicted RBP15.33■□□□□ 0.04
TTC39A-208ENST00000413473 DPYSQ14117 519 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 PAFAH1B3Q15102 231 aaKnown RBP15.33■□□□□ 0.04
TTC39A-208ENST00000413473 FAM72AQ5TYM5 149 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 FAM72DQ6L9T8 149 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 OSTM1Q86WC4 334 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 FAM72BQ86X60 149 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 PHTF2Q8N3S3 785 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 B3GALNT2Q8NCR0 500 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 GPRC5AQ8NFJ5 357 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 TNIP3Q96KP6 325 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 DDX50Q9BQ39 737 aaKnown RBP15.33■□□□□ 0.04
TTC39A-208ENST00000413473 DUSP16Q9BY84 665 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 FAM96AQ9H5X1 160 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 LRRC40Q9H9A6 602 aa15.33■□□□□ 0.04
TTC39A-208ENST00000413473 MAGED2Q9UNF1 606 aaPredicted RBP15.33■□□□□ 0.04
TTC39A-208ENST00000413473 HUS1O60921 280 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 MYL4P12829 197 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 ACAT1P24752 427 aaKnown RBP15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CRABP2P29373 138 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 SPRP35270 261 aaPredicted RBP15.32■□□□□ 0.04
TTC39A-208ENST00000413473 DEUP1Q05D60 604 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 PEX6Q13608 980 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 DLG2Q15700 870 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CCDC153Q494R4 210 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 HFE2Q6ZVN8 426 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CCDC124Q96CT7 223 aaKnown RBP15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CDCA5Q96FF9 252 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 ZNF560Q96MR9 790 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 RBBP8Q99708 897 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 PIDD1Q9HB75 910 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 MAN1C1Q9NR34 630 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 DCXO43602 365 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CCNT2O60583 730 aaKnown RBP15.32■□□□□ 0.04
TTC39A-208ENST00000413473 PTPN3P26045 913 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CDC16Q13042 620 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 THEMIS2Q5TEJ8 643 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 PGM2L1Q6PCE3 622 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 AAGABQ6PD74 315 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 NAPRTQ6XQN6 538 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 RAPH1Q70E73 1250 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 EFCAB3Q8N7B9 438 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 DNAAF3Q8N9W5 541 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 RNF169Q8NCN4 708 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
TTC39A-208ENST00000413473 OR6Y1Q8NGX8 325 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 ADAM32Q8TC27 787 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 SLC26A7Q8TE54 656 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CMTM5Q96DZ9 223 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 IFT43Q96FT9 208 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 HNRNPABQ99729 332 aaKnown RBP15.32■□□□□ 0.04
TTC39A-208ENST00000413473 CAB39LQ9H9S4 337 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 LRRC4Q9HBW1 653 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 BFARQ9NZS9 450 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 VANGL2Q9ULK5 521 aa15.32■□□□□ 0.04
TTC39A-208ENST00000413473 STAP1Q9ULZ2 295 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms