RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 LRRN4Q8WUT4 740 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 TFB1MQ8WVM0 346 aaKnown RBP6.84□□□□□ -1.31
VPS41-204ENST00000413141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.84□□□□□ -1.316e-6■■■■■ 28.1
VPS41-204ENST00000413141 IGSF8Q969P0 613 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 WBP2Q969T9 261 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 AZIN2Q96A70 460 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 HDAC11Q96DB2 347 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 MRPL38Q96DV4 380 aaKnown RBP6.84□□□□□ -1.31
VPS41-204ENST00000413141 TCEAL4Q96EI5 215 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 MYEOVQ96EZ4 313 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 PRICKLE1Q96MT3 831 aaPredicted RBP6.84□□□□□ -1.31
VPS41-204ENST00000413141 RPRD1AQ96P16 312 aaPredicted RBP6.84□□□□□ -1.31
VPS41-204ENST00000413141 CYP2S1Q96SQ9 504 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 LGMNQ99538 433 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 PRKD2Q9BZL6 878 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 FAM129AQ9BZQ8 928 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 TLE6Q9H808 572 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 SFXN1Q9H9B4 322 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 USP29Q9HBJ7 922 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 GKN1Q9NS71 199 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 ZDHHC18Q9NUE0 388 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 NDFIP2Q9NV92 336 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 DZANK1Q9NVP4 752 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 TMEM248Q9NWD8 314 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 SMPD4Q9NXE4 827 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 MPP6Q9NZW5 540 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 WHRNQ9P202 907 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 ZNF212Q9UDV6 495 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 STOML2Q9UJZ1 356 aa6.84□□□□□ -1.31
VPS41-204ENST00000413141 AGO1Q9UL18 857 aaKnown RBP6.84□□□□□ -1.31
VPS41-204ENST00000413141 TRANK1O15050 2925 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 NYNRINQ9P2P1 1898 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 TNRC18O15417 2968 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 CCDC195A0A1B0GUA6 201 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 SOBPA7XYQ1 873 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 RFXAPO00287 272 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 DNALI1O14645 258 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 ZNF189O75820 626 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 CNTN5O94779 1100 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 GLP2RO95838 553 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 FAM153BP0C7A2 387 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 CHRM1P11229 460 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 ITIH2P19823 946 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 MX2P20592 715 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 STIP1P31948 543 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 RPL22P35268 128 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 ADCY8P40145 1251 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 GARSP41250 739 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 MAPKAPK2P49137 400 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 ITGA8P53708 1063 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 NTHL1P78549 312 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 PPIDQ08752 370 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 AP1B1Q10567 949 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 GPS1Q13098 491 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 CALCOCO2Q13137 446 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 TEAD2Q15562 447 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 FAM153CQ494X1 144 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 ARHGAP15Q53QZ3 475 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 RABGAP1LQ5R372 815 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 GPR158Q5T848 1215 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 IZUMO3Q5VZ72 239 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 HIBCHQ6NVY1 386 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 RFWD3Q6PCD5 774 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 RHBDF2Q6PJF5 856 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 Q6ZNB5 142 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 GRASPQ7Z6J2 395 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 TFAP2DQ7Z6R9 452 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 CIR1Q86X95 450 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 FAM217AQ8IXS0 508 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 LGI2Q8N0V4 545 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 UMODL1-AS1Q8N2C9 162 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 ATPAF2Q8N5M1 289 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 LZTR1Q8N653 840 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 BBOF1Q8ND07 529 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 FBXO25Q8TCJ0 367 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 HTR3CQ8WXA8 447 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 ART4Q93070 314 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 CAVIN3Q969G5 261 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 PPP2R3CQ969Q6 453 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 P2RY11Q96G91 374 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 CELF6Q96J87 481 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 FMO2Q99518 471 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 SLC46A2Q9BY10 475 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 BRD8Q9H0E9 1235 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 PRDM12Q9H4Q4 367 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 NSUN3Q9H649 340 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 NOL6Q9H6R4 1146 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 ARFGAP3Q9NP61 516 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 ZNF446Q9NWS9 450 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 PAK5Q9P286 719 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 FAM153AQ9UHL3 310 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 LSM7Q9UK45 103 aaKnown RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 ARHGAP26Q9UNA1 814 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
VPS41-204ENST00000413141 NOTCH4Q99466 2003 aa6.83□□□□□ -1.32
VPS41-204ENST00000413141 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
VPS41-204ENST00000413141 DOCK4Q8N1I0 1966 aa6.82□□□□□ -1.32
VPS41-204ENST00000413141 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
VPS41-204ENST00000413141 A0A0A0MRY4 1105 aa6.82□□□□□ -1.32
VPS41-204ENST00000413141 A0A1B0GVM2 712 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms