RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 HOOK3Q86VS8 718 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 TMC8Q8IU68 726 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 ATPAF2Q8N5M1 289 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 CCDC33Q8N5R6 958 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 NPWQ8N729 165 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 RTL3Q8N8U3 475 aaKnown RBP11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 TSEN2Q8NCE0 465 aaKnown RBP11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 RPRD1AQ96P16 312 aaPredicted RBP11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 CORO1BQ9BR76 489 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 KLF16Q9BXK1 252 aaPredicted RBP11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 KLC2Q9H0B6 622 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 IL21Q9HBE4 155 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 USP29Q9HBJ7 922 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 SEPT10Q9P0V9 454 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 NEU3Q9UQ49 428 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 ATP8A1Q9Y2Q0 1164 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 YBX2Q9Y2T7 364 aaKnown RBP11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 CHD5Q8TDI0 1954 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 MIA3Q5JRA6 1907 aa11.94□□□□□ -0.5
SNRNP35-202ENST00000412157 SPTBN5Q9NRC6 3674 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 NUP210Q8TEM1 1887 aaPredicted RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 IGLV3-10A0A075B6K4 115 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 A0A0A0MRY4 1105 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 TRAV19A0A0A6YYK7 116 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 GOLGA6BA6NDN3 693 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 C5orf60A6NFR6 353 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 DFFAO00273 331 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 CLASP2O75122 1294 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 XYLBO75191 536 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 GCATO75600 419 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 STC2O76061 302 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 LATS1O95835 1130 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 HNRNPA1P09651 372 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 VAV1P15498 845 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 PFKLP17858 780 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 COL9A1P20849 921 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 CORO1AP31146 461 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 FDFT1P37268 417 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 GARSP41250 739 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 KCNQ1P51787 676 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 PMS2P54278 862 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 CYP4F8P98187 520 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 ZNF33AQ06730 810 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 PPIDQ08752 370 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 RNASEH2BQ5TBB1 312 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 ALS2CLQ60I27 953 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 PPP2R2DQ66LE6 453 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 TIGD7Q6NT04 549 aaPredicted RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 PPP1R21Q6ZMI0 780 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 SPRED2Q7Z698 418 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 TMEM150AQ86TG1 271 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 CCDC13Q8IYE1 715 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 HS6ST3Q8IZP7 471 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 LGI2Q8N0V4 545 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 TAB3Q8N5C8 712 aaPredicted RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 LEMD2Q8NC56 503 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 CCDC110Q8TBZ0 833 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 SLC22A17Q8WUG5 538 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 AZIN2Q96A70 460 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 TIFAQ96CG3 184 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 P2RY11Q96G91 374 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 CELF6Q96J87 481 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 SPATA13Q96N96 652 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 LGMNQ99538 433 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 NKX2-4Q9H2Z4 354 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 ATXN3LQ9H3M9 355 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 ZNF576Q9H609 170 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 RAB6BQ9NRW1 208 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 TMEM248Q9NWD8 314 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 MPP6Q9NZW5 540 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 LSM7Q9UK45 103 aaKnown RBP11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 CDH23Q9H251 3354 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 DOCK6Q96HP0 2047 aa11.93□□□□□ -0.5
SNRNP35-202ENST00000412157 ARHGAP42A6NI28 874 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 E7EVH7 732 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 RNF103O00237 685 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 CHADO15335 359 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 OPHN1O60890 802 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 CKMP06732 381 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 PTPN2P17706 415 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 HDCP19113 662 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 HSD17B3P37058 310 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 MAPKAPK2P49137 400 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 NDST2P52849 883 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ARL4CP56559 192 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 FAM193AP78312 1265 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ARHGAP15Q53QZ3 475 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 HSP90B2PQ58FF3 399 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ANKRD20A2Q5SQ80 823 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ANKRD20A1Q5TYW2 823 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ANKRD20A3Q5VUR7 823 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 TXNDC8Q6A555 127 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ITPRIPL1Q6GPH6 555 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 NADSYN1Q6IA69 706 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 FBXL22Q6P050 247 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 CENPUQ71F23 418 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 DENND1CQ8IV53 801 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ZNF683Q8IZ20 524 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms