RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 SDE2Q6IQ49 451 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 RWDD4Q6NW29 188 aaKnown RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 PPP1R2P3Q6NXS1 205 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 LRRC31Q6UY01 552 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 CPNE8Q86YQ8 564 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 CNGA4Q8IV77 575 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 AHI1Q8N157 1196 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 MDGA1Q8NFP4 955 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 CCDC26Q8TAB7 109 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 UCMAQ8WVF2 138 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 MRFAP1L1Q96HT8 127 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 HAPLN3Q96S86 360 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 THAP10Q9P2Z0 257 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-202ENST00000411739 NENFQ9UMX5 172 aa12.34□□□□□ -0.43
NEDD1-202ENST00000411739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 A0A1B0GVM2 712 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 TCAF2A6NFQ2 919 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 APBB3O95704 486 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 ZNF177Q13360 481 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 ARL13BQ3SXY8 428 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 KIAA0907Q7Z7F0 614 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 SLFN11Q7Z7L1 901 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 ZBTB44Q8NCP5 570 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 NELL1Q92832 810 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 C1orf74Q96LT6 269 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 PEBP4Q96S96 227 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 KIAA1522Q9P206 1035 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 BCCIPQ9P287 314 aaKnown RBP eCLIP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 DRGXA6NNA5 263 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 CREB3O43889 395 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 PAPSS2O95340 614 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 MYBL1P10243 752 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 STK19P49842 368 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 CA9Q16790 459 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 RNF219Q5W0B1 726 aaPredicted RBP12.33□□□□□ -0.44
NEDD1-202ENST00000411739 SERPINA13PQ6UXR4 307 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 LONP2Q86WA8 852 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 TRIM11Q96F44 468 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 CD93Q9NPY3 652 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 NDFIP2Q9NV92 336 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 SLCO3A1Q9UIG8 710 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 PLA2G4CQ9UP65 541 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
NEDD1-202ENST00000411739 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 A0A0D9SEW6 157 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 AXIN1O15169 862 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 LRIG2O94898 1065 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 CYP1A2P05177 515 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 EPHX1P07099 455 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 NBL1P41271 181 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 CDH4P55283 916 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 PLEKHG6Q3KR16 790 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 PRR23BQ6ZRT6 265 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-202ENST00000411739 WFIKKN2Q8TEU8 576 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 IRF2BPLQ9H1B7 796 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
NEDD1-202ENST00000411739 ANAPC7Q9UJX3 599 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 FZD10Q9ULW2 581 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 TFR2Q9UP52 801 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-202ENST00000411739 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 SSU72P8A0A1W2PR75 194 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 CLDN11O75508 207 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 DLDP09622 509 aaKnown RBP12.32□□□□□ -0.44
NEDD1-202ENST00000411739 GABRG2P18507 467 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 MIPP30301 263 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 NRLP54845 237 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 C5orf22Q49AR2 442 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 ASCL5Q7RTU5 278 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 TRMT11Q7Z4G4 463 aaKnown RBP12.32□□□□□ -0.44
NEDD1-202ENST00000411739 CAMKK1Q8N5S9 505 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 OR7D4Q8NG98 312 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 GABRG3Q99928 467 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 FEM1AQ9BSK4 669 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 IRX2Q9BZI1 471 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-202ENST00000411739 MUC3BQ9H195 1237 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 POLMQ9NP87 494 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-202ENST00000411739 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 DNAI1Q9UI46 699 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 PCDHGA2Q9Y5H1 932 aa12.32□□□□□ -0.44
NEDD1-202ENST00000411739 TMEM110-MUSTN1A8MSY1 372 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 TTC34A8MYJ7 566 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 TIMM44O43615 452 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 SNAP91O60641 907 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 LRCH4O75427 683 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 ATP5BP06576 529 aaKnown RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 RHOCP08134 193 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 GLDCP23378 1020 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 OR1E1P30953 314 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 EIF4HQ15056 248 aaKnown RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 EFHC2Q5JST6 749 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms