RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CACNA1AO00555 2505 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 TYW5A2RUC4 315 aaKnown RBP19.67■□□□□ 0.74
SF3A1-202ENST00000411423 AP5Z1O43299 807 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 CNTN5O94779 1100 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 ATP5BP06576 529 aaKnown RBP19.67■□□□□ 0.74
SF3A1-202ENST00000411423 SLC2A3P11169 496 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 PDGFRAP16234 1089 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 STK19P49842 368 aaPredicted RBP19.67■□□□□ 0.74
SF3A1-202ENST00000411423 LIMK1P53667 647 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 DEUP1Q05D60 604 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 PLEKHG6Q3KR16 790 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 SLC25A52Q3SY17 297 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 C5orf22Q49AR2 442 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 SPDYCQ5MJ68 293 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 STPG1Q5TH74 334 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 JOSD2Q8TAC2 188 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 BAP1Q92560 729 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 PRCCQ92733 491 aaPredicted RBP19.67■□□□□ 0.74
SF3A1-202ENST00000411423 TOE1Q96GM8 510 aaKnown RBP19.67■□□□□ 0.74
SF3A1-202ENST00000411423 HSPA12BQ96MM6 686 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 NAP1L5Q96NT1 182 aaPredicted RBP19.67■□□□□ 0.74
SF3A1-202ENST00000411423 C11orf70Q9BRQ4 267 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 EDEM2Q9BV94 578 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 KIAA1522Q9P206 1035 aaPredicted RBP19.67■□□□□ 0.74
SF3A1-202ENST00000411423 SLC12A6Q9UHW9 1150 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 SLCO3A1Q9UIG8 710 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 ERVW-1Q9UQF0 538 aa19.67■□□□□ 0.74
SF3A1-202ENST00000411423 SYCE3A1L190 88 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 TTC34A8MYJ7 566 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 CDX4O14627 284 aaPredicted RBP19.66■□□□□ 0.74
SF3A1-202ENST00000411423 ZBTB24O43167 697 aaPredicted RBP19.66■□□□□ 0.74
SF3A1-202ENST00000411423 IGLV3-19P01714 112 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 CD6P30203 668 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 ZNF165P49910 485 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 RPS14P62263 151 aaKnown RBP19.66■□□□□ 0.74
SF3A1-202ENST00000411423 CLEC16AQ2KHT3 1053 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 KLHL40Q2TBA0 621 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 ALFQ53S48 1182 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 SH3PXD2AQ5TCZ1 1133 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 SYT12Q8IV01 421 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 ZNF557Q8N988 423 aaPredicted RBP19.66■□□□□ 0.74
SF3A1-202ENST00000411423 ZNF419Q96HQ0 510 aaPredicted RBP19.66■□□□□ 0.74
SF3A1-202ENST00000411423 RPL10LQ96L21 214 aaKnown RBP19.66■□□□□ 0.74
SF3A1-202ENST00000411423 RPRD1AQ96P16 312 aaPredicted RBP19.66■□□□□ 0.74
SF3A1-202ENST00000411423 SIK2Q9H0K1 926 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 RRN3Q9NYV6 651 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 STAP1Q9ULZ2 295 aa19.66■□□□□ 0.74
SF3A1-202ENST00000411423 A0A1B0GVM2 712 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 TCAF2A6NFQ2 919 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 KHNYNO15037 678 aaKnown RBP19.65■□□□□ 0.74
SF3A1-202ENST00000411423 FOXD2O60548 495 aaPredicted RBP19.65■□□□□ 0.74
SF3A1-202ENST00000411423 SIN3BO75182 1162 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 SDHBP21912 280 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 MAOBP27338 520 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 C15orf59Q2T9L4 293 aaPredicted RBP19.65■□□□□ 0.74
SF3A1-202ENST00000411423 TRIM61Q5EBN2 209 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 BRMS1LQ5PSV4 323 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 RABGAP1LQ5R372 815 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 SYT11Q9BT88 431 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 GPR174Q9BXC1 333 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 MAGEB5Q9BZ81 275 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 NAT10Q9H0A0 1025 aaKnown RBP19.65■□□□□ 0.74
SF3A1-202ENST00000411423 WDCPQ9H6R7 721 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 OR51B4Q9Y5P0 310 aa19.65■□□□□ 0.74
SF3A1-202ENST00000411423 ASLP04424 464 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 VAV1P15498 845 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 ATP11AP98196 1134 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 ECT2LQ008S8 904 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 E2F5Q15329 346 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 HNRNPA1L2Q32P51 320 aaKnown RBP19.64■□□□□ 0.73
SF3A1-202ENST00000411423 CCDC14Q49A88 953 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 C9orf64Q5T6V5 341 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 E4F1Q66K89 784 aaPredicted RBP19.64■□□□□ 0.73
SF3A1-202ENST00000411423 ARCQ7LC44 396 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 IRF2BP2Q7Z5L9 587 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 FAM124AQ86V42 546 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 FAM131BQ86XD5 332 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 RXFP2Q8WXD0 754 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 AGPAT1Q99943 283 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 EVLQ9UI08 416 aaPredicted RBP19.64■□□□□ 0.73
SF3A1-202ENST00000411423 PCDH15Q96QU1 1955 aa19.64■□□□□ 0.73
SF3A1-202ENST00000411423 ITIH6Q6UXX5 1313 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 A0A1B0GTH6 734 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 TCRBV5S1A1TA0A578 114 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 C2CD4BA6NLJ0 364 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 C4orf47A7E2U8 309 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 SMTNL1A8MU46 457 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 NDUFS2O75306 463 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 ENDOD1O94919 500 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 ACSL1P33121 698 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 PLK1P53350 603 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 TTC39BQ5VTQ0 682 aaPredicted RBP19.63■□□□□ 0.73
SF3A1-202ENST00000411423 SLC23A3Q6PIS1 610 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 TRIM72Q6ZMU5 477 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 MON1BQ7L1V2 547 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 MSANTD4Q8NCY6 345 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 CBX8Q9HC52 389 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 TAS2R14Q9NYV8 317 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 SERGEFQ9UGK8 458 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 SUN2Q9UH99 717 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms