RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CCDC170Q8IYT3 715 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 PYROXD2Q8N2H3 581 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 NIPA2Q8N8Q9 360 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 SORCS1Q8WY21 1168 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 CTNNBL1Q8WYA6 563 aaPredicted RBP23.04■■□□□ 1.28
PTCD3-203ENST00000409783 TTC17Q96AE7 1141 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 ALG14Q96F25 216 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 CD248Q9HCU0 757 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 KIAA1522Q9P206 1035 aaPredicted RBP23.04■■□□□ 1.28
PTCD3-203ENST00000409783 PPARGC1AQ9UBK2 798 aaKnown RBP23.04■■□□□ 1.28
PTCD3-203ENST00000409783 ANAPC7Q9UJX3 599 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 SRGAP2O75044 1071 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 LRIG2O94898 1065 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 MIPP30301 263 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 NTSR1P30989 418 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 AIF1P55008 147 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 DMWDQ09019 674 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 CRY1Q16526 586 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 DAB2IPQ5VWQ8 1189 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 TMEM139Q8IV31 216 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 APCDD1Q8J025 514 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 ZNF564Q8TBZ8 553 aaPredicted RBP23.03■■□□□ 1.28
PTCD3-203ENST00000409783 GABRG3Q99928 467 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 CIPCQ9C0C6 399 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 UVRAGQ9P2Y5 699 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 OR51B4Q9Y5P0 310 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 CHD5Q8TDI0 1954 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 CKAP5Q14008 2032 aa23.03■■□□□ 1.28
PTCD3-203ENST00000409783 EML5Q05BV3 1969 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 SOWAHDA6NJG2 315 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 WASH3PC4AMC7 463 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 RNF8O76064 485 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 TCF4P15884 667 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 DESP17661 470 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 MZF1P28698 734 aaPredicted RBP23.02■■□□□ 1.28
PTCD3-203ENST00000409783 L1CAMP32004 1257 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 PCK1P35558 622 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 CSKP41240 450 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 PLK1P53350 603 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 PIGHQ14442 188 aaPredicted RBP23.02■■□□□ 1.28
PTCD3-203ENST00000409783 ZNF234Q14588 700 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 PTPRNQ16849 979 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 PLEKHG6Q3KR16 790 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 PITRM1Q5JRX3 1037 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 EFHC2Q5JST6 749 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 EOGTQ5NDL2 527 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 TRMT11Q7Z4G4 463 aaKnown RBP23.02■■□□□ 1.28
PTCD3-203ENST00000409783 TMTC1Q8IUR5 882 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 CCDC117Q8IWD4 279 aaPredicted RBP23.02■■□□□ 1.28
PTCD3-203ENST00000409783 UCMAQ8WVF2 138 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 SNRNP25Q9BV90 132 aaKnown RBP23.02■■□□□ 1.28
PTCD3-203ENST00000409783 ZYG11BQ9C0D3 744 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 OSGEPQ9NPF4 335 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 CACNA2D2Q9NY47 1150 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 CTTNBP2NLQ9P2B4 639 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 PCSK1NQ9UHG2 260 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 IP6K2Q9UHH9 426 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 INTUQ9ULD6 942 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 SLC8A2Q9UPR5 921 aa23.02■■□□□ 1.28
PTCD3-203ENST00000409783 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.01■■□□□ 1.27
PTCD3-203ENST00000409783 A0A1W2PQF6 199 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 IL1R2P27930 398 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 IL12RB1P42701 662 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 WASP42768 502 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 ZNF177Q13360 481 aaPredicted RBP23.01■■□□□ 1.27
PTCD3-203ENST00000409783 SLC12A1Q13621 1099 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 CA9Q16790 459 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 NLRP14Q86W24 1093 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 CHPFQ8IZ52 775 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 CYB5D2Q8WUJ1 264 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 MYO19Q96H55 970 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 HHIPQ96QV1 700 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 NCAPGQ9BPX3 1015 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 GPATCH2LQ9NWQ4 482 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 USP18Q9UMW8 372 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 STON1Q9Y6Q2 735 aa23.01■■□□□ 1.27
PTCD3-203ENST00000409783 EIF3CLB5ME19 914 aaKnown RBP23■■□□□ 1.27
PTCD3-203ENST00000409783 MYO1FO00160 1098 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 NPC1O15118 1278 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 MTA2O94776 668 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 DLDP09622 509 aaKnown RBP23■■□□□ 1.27
PTCD3-203ENST00000409783 POLR2EP19388 210 aaKnown RBP23■■□□□ 1.27
PTCD3-203ENST00000409783 TCEAL1Q15170 157 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 ERMARDQ5T6L9 678 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 RAD9BQ6WBX8 426 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 TFAP2DQ7Z6R9 452 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 SETD3Q86TU7 594 aaPredicted RBP23■■□□□ 1.27
PTCD3-203ENST00000409783 CPNE8Q86YQ8 564 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 CAMKK1Q8N5S9 505 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 ZBTB44Q8NCP5 570 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 SLC35G2Q8TBE7 412 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 TBC1D31Q96DN5 1066 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 MRGPRX3Q96LB0 322 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 EIF3CQ99613 913 aaKnown RBP23■■□□□ 1.27
PTCD3-203ENST00000409783 FEM1AQ9BSK4 669 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 FAM126AQ9BYI3 521 aaPredicted RBP23■■□□□ 1.27
PTCD3-203ENST00000409783 AP4E1Q9UPM8 1137 aa23■■□□□ 1.27
PTCD3-203ENST00000409783 EPN1Q9Y6I3 576 aaPredicted RBP23■■□□□ 1.27
PTCD3-203ENST00000409783 PRPSAP2O60256 369 aa22.99■■□□□ 1.27
PTCD3-203ENST00000409783 NDUFA10O95299 355 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms