RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ARFGAP1Q8N6T3 406 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 SORCS1Q8WY21 1168 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 GABRG3Q99928 467 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 NCAPGQ9BPX3 1015 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 MPP6Q9NZW5 540 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 INTS6Q9UL03 887 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 PLA2G4CQ9UP65 541 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 TBC1D30Q9Y2I9 924 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 PCDHGA2Q9Y5H1 932 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 VPS13AQ96RL7 3174 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 CNTN5O94779 1100 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 MOCS3O95396 460 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 APBB3O95704 486 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 DLDP09622 509 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 TMEM253P0C7T8 217 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 NHLH1Q02575 133 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ENPP2Q13822 863 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 PIGHQ14442 188 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ALFQ53S48 1182 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 MANEALQ5VSG8 457 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 TMEM92Q6UXU6 159 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 CCDC170Q8IYT3 715 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ZBTB44Q8NCP5 570 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 TSTD1Q8NFU3 115 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 TTC17Q96AE7 1141 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 HHIPQ96QV1 700 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 PPP1R9BQ96SB3 815 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ZYG11BQ9C0D3 744 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 CACNA2D2Q9NY47 1150 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 IMPACTQ9P2X3 320 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 UVRAGQ9P2Y5 699 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 FZD10Q9ULW2 581 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 CCDC163A0A0D9SF12 145 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 FAM72CH0Y354 149 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 MYO1FO00160 1098 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 HOXC13P31276 330 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 L1CAMP32004 1257 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 PCK1P35558 622 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 CSKP41240 450 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ZNF234Q14588 700 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 PLEKHG6Q3KR16 790 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 PITRM1Q5JRX3 1037 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 FAM72AQ5TYM5 149 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 FAM72DQ6L9T8 149 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 FAM72BQ86X60 149 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 NIPA2Q8N8Q9 360 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ATRIPQ8WXE1 791 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 MAGEB5Q9BZ81 275 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 RETREG1Q9H6L5 497 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 CTTNBP2NLQ9P2B4 639 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 IP6K2Q9UHH9 426 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 ANAPC7Q9UJX3 599 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 STON1Q9Y6Q2 735 aa20.43■□□□□ 0.86
PDLIM2-207ENST00000409417 A0A1W2PQF6 199 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 WASH3PC4AMC7 463 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 PRPSAP2O60256 369 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 LRCH4O75427 683 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 LRIG2O94898 1065 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 ASLP04424 464 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 HOXB2P14652 356 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 FECHP22830 423 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 MIPP30301 263 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 WASP42768 502 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 PLK1P53350 603 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 DMWDQ09019 674 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 PTPRNQ16849 979 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 HEATR6Q6AI08 1181 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 ZC3H14Q6PJT7 736 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 TFAP2DQ7Z6R9 452 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 SETD3Q86TU7 594 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 LONP2Q86WA8 852 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 ZNF564Q8TBZ8 553 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 CYB5D2Q8WUJ1 264 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 FEM1AQ9BSK4 669 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 POLMQ9NP87 494 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 ZNF212Q9UDV6 495 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 EBF1Q9UH73 591 aa20.42■□□□□ 0.86
PDLIM2-207ENST00000409417 EIF3CLB5ME19 914 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 MZF1P28698 734 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 NBL1P41271 181 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 IL12RB1P42701 662 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 FNTBP49356 437 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 C6orf118Q5T5N4 469 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 ERMARDQ5T6L9 678 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 RWDD4Q6NW29 188 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 SERPINA13PQ6UXR4 307 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 TMTC1Q8IUR5 882 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 APCDD1Q8J025 514 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 PYROXD2Q8N2H3 581 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 OR52K2Q8NGK3 314 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 TBC1D31Q96DN5 1066 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 EIF3CQ99613 913 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 FAM86C1Q9NVL1 165 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 PCSK1NQ9UHG2 260 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 INTUQ9ULD6 942 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 USP18Q9UMW8 372 aa20.41■□□□□ 0.86
PDLIM2-207ENST00000409417 ALDH1A2O94788 518 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 LCA5LO95447 670 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 OR1E1P30953 314 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms