RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 GBX1Q14549 363 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 PLS1Q14651 629 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 ARHGEF6Q15052 776 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 UAP1Q16222 522 aaPredicted RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 MTHFSDQ2M296 383 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 CNPY1Q3B7I2 92 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 HSP90AA5PQ58FG0 334 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 RNF220Q5VTB9 566 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 KLHDC10Q6PID8 442 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 FAM180AQ6UWF9 173 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 SYDE1Q6ZW31 735 aaPredicted RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 USP45Q70EL2 814 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 MB21D2Q8IYB1 491 aaPredicted RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 MYOCDQ8IZQ8 938 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 ARHGAP24Q8N264 748 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 SAMD3Q8N6K7 520 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 PI4KAP1Q8N8J0 262 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 TBC1D16Q8TBP0 767 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 NEK9Q8TD19 979 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 ACTRT1Q8TDG2 376 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 WDR60Q8WVS4 1066 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 NRG4Q8WWG1 115 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 NKD2Q969F2 451 aaPredicted RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 CLMNQ96JQ2 1002 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 PWWP2AQ96N64 755 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 DEFB118Q96PH6 123 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 POLR3CQ9BUI4 534 aaPredicted RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 TLR10Q9BXR5 811 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 EIF2AQ9BY44 585 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 BRD8Q9H0E9 1235 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 DMRT3Q9NQL9 472 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 USP40Q9NVE5 1235 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 PTTG2Q9NZH5 202 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 ZNF212Q9UDV6 495 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 INTUQ9ULD6 942 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 SSX2IPQ9Y2D8 614 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 VWA7Q9Y334 891 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 CCDC154A6NI56 674 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 TMEM110-MUSTN1A8MSY1 372 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 BTNL10A8MVZ5 291 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PI4K2BG5E9Z4 385 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 ZBTB43O43298 467 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 HTRA2O43464 458 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 STRNO43815 780 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 ATP9AO75110 1047 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 LY86O95711 162 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 A1BGP04217 495 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 ITGA2BP08514 1039 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MED14OSP0DP75 135 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CYP11B2P19099 503 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PI3P19957 117 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CTGFP29279 349 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MLH1P40692 756 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 TUBP50607 506 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CDK7P50613 346 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 STAT5BP51692 787 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 RCAN1P53805 252 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 RPL26P61254 145 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 CD69Q07108 199 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MESP2Q0VG99 397 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MYBPC2Q14324 1141 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 SSPNQ14714 243 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 INAQ16352 499 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 LIN52Q52LA3 116 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 C9orf50Q5SZB4 431 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 C10orf76Q5T2E6 689 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 KLHDC7AQ5VTJ3 777 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PHLDB2Q86SQ0 1253 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 TMEM110Q86TL2 294 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 RSPH3Q86UC2 560 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 LONP2Q86WA8 852 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CROCCP3Q8IVE0 287 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 NELFCDQ8IXH7 590 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 GRAMD1CQ8IYS0 662 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 SDR16C5Q8N3Y7 309 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PRR18Q8N4B5 295 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 GBF1Q92538 1859 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 DHTKD1Q96HY7 919 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 FAM84AQ96KN4 292 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 ZMAT2Q96NC0 199 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 RUNDC3BQ96NL0 473 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 INPP4AQ96PE3 977 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 FMO2Q99518 471 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 ROPN1BQ9BZX4 212 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 ROPN1Q9HAT0 212 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 MAGEF1Q9HAY2 307 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 ARNT2Q9HBZ2 717 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 EPB41L4AQ9HCS5 686 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 C1orf112Q9NSG2 853 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 NMRK1Q9NWW6 199 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 MIS18AQ9NYP9 233 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 NTMQ9P121 344 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 SUCLA2Q9P2R7 463 aaPredicted RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 RASAL2Q9UJF2 1139 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 ANGPTL2Q9UKU9 493 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 USP24Q9UPU5 2620 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 PA2G4Q9UQ80 394 aaKnown RBP5.69□□□□□ -1.5
CLK1-202ENST00000409403 IPPQ9Y573 584 aa5.69□□□□□ -1.5
CLK1-202ENST00000409403 CTDP1Q9Y5B0 961 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms