RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RCOR2Q8IZ40 523 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 CPA6Q8N4T0 437 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 NPWQ8N729 165 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 PQLC3Q8N755 202 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 EXD1Q8NHP7 514 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 CSGALNACT1Q8TDX6 532 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 COG1Q8WTW3 980 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 OTUB2Q96DC9 234 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 MS4A14Q96JA4 679 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 NAPGQ99747 312 aaPredicted RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 FAM118BQ9BPY3 351 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 SAE1Q9UBE0 346 aaPredicted RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 MUTYHQ9UIF7 546 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 COL4A2P08572 1712 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 ATG2BQ96BY7 2078 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 hCG_1818297A0A087WSY0 165 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 TCRBV7S2A1N4TA0A589 114 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 TYW5A2RUC4 315 aaKnown RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 ANTXRLA6NF34 631 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 DRGXA6NNA5 263 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 CEP104O60308 925 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 LUC7L3O95232 432 aaKnown RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 OR1E1P30953 314 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 CASQ1P31415 396 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 GJA4P35212 333 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 NRG1Q02297 640 aaPredicted RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 CDH18Q13634 790 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 ITPRIPL2Q3MIP1 535 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 C1orf228Q6PIY5 440 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 NLRP14Q86W24 1093 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 MAP7D3Q8IWC1 876 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 FAM71BQ8TC56 605 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 RBM41Q96IZ5 413 aaKnown RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 RNF157Q96PX1 679 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 ZNF670Q9BS34 389 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 DNAJC17Q9NVM6 304 aaKnown RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 CA14Q9ULX7 337 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 A0A0D9SEW6 157 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 A0A1B0GVM2 712 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 CTAGE9A4FU28 777 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 TCAF2A6NFQ2 919 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 DCLK1O15075 740 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 PENKP01210 267 aaPredicted RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 CD72P21854 359 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 MZF1P28698 734 aaPredicted RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 HOXC13P31276 330 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 CD70P32970 193 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 GAD2Q05329 585 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 MTA1Q13330 715 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 KCTD19Q17RG1 926 aaPredicted RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 TFDP3Q5H9I0 405 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 NCBP2-AS2Q69YL0 99 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 CXorf57Q6NSI4 855 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 TXNDC11Q6PKC3 985 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 GJD3Q8N144 294 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 RTL3Q8N8U3 475 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 NXPE3Q969Y0 559 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 CAPZA3Q96KX2 299 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 OSBPL9Q96SU4 736 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 MAK16Q9BXY0 300 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 OSBPL8Q9BZF1 889 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 ABCB8Q9NUT2 735 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 TMEM51Q9NW97 253 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 PPARGC1AQ9UBK2 798 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 ZNF212Q9UDV6 495 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 SHROOM3Q8TF72 1996 aa14.5□□□□□ -0.09
CHRNA1-204ENST00000409323 NYNRINQ9P2P1 1898 aaKnown RBP14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 KIF2AO00139 706 aaPredicted RBP14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 MFSD11O43934 449 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 CST8O60676 142 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 TULP3O75386 442 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 SRFP11831 508 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 RHOQP17081 205 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 HLA-FP30511 346 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 ACVRL1P37023 503 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 CSKP41240 450 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 CDH4P55283 916 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 GBE1Q04446 702 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 LMAN2Q12907 356 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 ZNF177Q13360 481 aaPredicted RBP14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 C5orf22Q49AR2 442 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 SEL1L2Q5TEA6 688 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 PLD5Q8N7P1 536 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 OR7D4Q8NG98 312 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 FAF2Q96CS3 445 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 NOL6Q9H6R4 1146 aaKnown RBP14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 CATSPERBQ9H7T0 1116 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 FBRSL1Q9HCM7 1045 aaKnown RBP14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 TMEM248Q9NWD8 314 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 SNX12Q9UMY4 172 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 DUSP12Q9UNI6 340 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 HEY1Q9Y5J3 304 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 PIAS3Q9Y6X2 628 aa14.49□□□□□ -0.09
CHRNA1-204ENST00000409323 DFFAO00273 331 aa14.48□□□□□ -0.09
CHRNA1-204ENST00000409323 APOL1O14791 398 aa14.48□□□□□ -0.09
CHRNA1-204ENST00000409323 HOXC11O43248 304 aaPredicted RBP14.48□□□□□ -0.09
CHRNA1-204ENST00000409323 RHOCP08134 193 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms