RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 FAM133BQ5BKY9 247 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 MPP7Q5T2T1 576 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 PIK3R6Q5UE93 754 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3GQ6DHY5 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3CQ6IPX1 549 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 CNNM4Q6P4Q7 775 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TBC1D3Q8IZP1 549 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 ULBP1Q9BZM6 244 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 LRRC27Q9C0I9 530 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 CAAP1Q9H8G2 361 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TJP2Q9UDY2 1190 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 U3KQA8 63 aa13.34□□□□□ -0.27
CHRNA1-203ENST00000409219 TEX15Q9BXT5 2789 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 TARSL2A2RTX5 802 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 ZBED1O96006 694 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 NTRK1P04629 796 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 MYF5P13349 255 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 C5AR1P21730 350 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 MZF1P28698 734 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 CTSOP43234 321 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 ZNF394Q53GI3 561 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 HS1BP3Q53T59 392 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 C1orf220Q5T0J3 134 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 PM20D1Q6GTS8 502 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 CCDC81Q6ZN84 652 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 UNC13DQ70J99 1090 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 STK40Q8N2I9 435 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 KDM1BQ8NB78 822 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 EDEM1Q92611 657 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 PRICKLE1Q96MT3 831 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 NIF3L1Q9GZT8 377 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 CYP3A43Q9HB55 503 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC39A2Q9NP94 309 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 CYTH4Q9UIA0 394 aa13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 MORC2Q9Y6X9 1032 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-203ENST00000409219 UNC79Q9P2D8 2635 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 GOLGA6L7A0A1B0GV03 622 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 GP1BAP07359 652 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 CASP1P29466 404 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 STAT4Q14765 748 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 RABEP1Q15276 862 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 ISXQ2M1V0 245 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 PRPF39Q86UA1 669 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 HSCBQ8IWL3 235 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 ZNF557Q8N988 423 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 FIBINQ8TAL6 211 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 RNF139Q8WU17 664 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 PTPRN2Q92932 1015 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 MYEOVQ96EZ4 313 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 PRR11Q96HE9 360 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 APOLD1Q96LR9 279 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 CUEDC2Q9H467 287 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 DMAC2Q9NW81 257 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 STIM2Q9P246 746 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 ERVW-1Q9UQF0 538 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 FLNCQ14315 2725 aa13.32□□□□□ -0.28
CHRNA1-203ENST00000409219 PMS2P1A4D2B8 440 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 CDRT15L2A8MXV6 281 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 TULP2O00295 520 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 PLRG1O43660 514 aaKnown RBP13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 RTN2O75298 545 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 IL1BP01584 269 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 AMPD3Q01432 767 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 CLN3Q13286 438 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 ZSCAN23Q3MJ62 389 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 LINC00303Q3SY05 128 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 POM121L1PQ3SYA9 428 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 TAS1R2Q8TE23 839 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 DHX58Q96C10 678 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 CCDC97Q96F63 343 aaPredicted RBP13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC46A1Q96NT5 459 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 USP28Q96RU2 1077 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 C7orf25Q9BPX7 421 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 IRX2Q9BZI1 471 aaPredicted RBP13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 UBXN6Q9BZV1 441 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 OSBPL2Q9H1P3 480 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 STARD5Q9NSY2 213 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 ANKMY1Q9P2S6 941 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 SLCO3A1Q9UIG8 710 aa13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
CHRNA1-203ENST00000409219 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 YJEFN3A6XGL0 299 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 E7ENQ6 273 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 IKBKBO14920 756 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 IRAK2O43187 625 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 PIAS2O75928 621 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 IGLV3-27P01718 113 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 SRPRAP08240 638 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 THEGLP0DJG4 465 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 VAV1P15498 845 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 TGM2P21980 687 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms