RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 NCF1BA6NI72 391 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-203ENST00000409161 NCF1CA8MVU1 366 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-203ENST00000409161 OPLAHO14841 1288 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 CPSF4O95639 269 aaKnown RBP12.38□□□□□ -0.43
SHANK2-203ENST00000409161 HIST1H2ABP04908 130 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 NCF1P14598 390 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-203ENST00000409161 AP3S2P59780 193 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 PAGE2BQ5JRK9 111 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 LMBRD2Q68DH5 695 aaPredicted RBP12.38□□□□□ -0.43
SHANK2-203ENST00000409161 GALNT18Q6P9A2 607 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 HIST3H2AQ7L7L0 130 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 USP7Q93009 1102 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 HIST1H2ACQ93077 130 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 AGPAT3Q9NRZ7 376 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 DPP3Q9NY33 737 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 FAM92BQ6ZTR7 304 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 MTMR4Q9NYA4 1195 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 ENTPD4Q9Y227 616 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 TBC1D30Q9Y2I9 924 aa12.38□□□□□ -0.43
SHANK2-203ENST00000409161 M0QYT0 321 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 SGTAO43765 313 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 GLRBP48167 497 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PYDC2Q56P42 97 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 FGD3Q5JSP0 725 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 MOXD1Q6UVY6 613 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 MTSS1LQ765P7 747 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 KCNMB4Q86W47 210 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 ATXN10Q9UBB4 475 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 ZNF222Q9UK12 451 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 ST3GAL5Q9UNP4 418 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 ERI2A8K979 691 aaKnown RBP12.37□□□□□ -0.43
SHANK2-203ENST00000409161 N4BP2L1Q5TBK1 243 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-203ENST00000409161 SAMD3Q8N6K7 520 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 CRYL1Q9Y2S2 319 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.37□□□□□ -0.43
SHANK2-203ENST00000409161 NDUFB5O43674 189 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PTPN3P26045 913 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 SQLEQ14534 574 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 TAF13Q15543 124 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PANX3Q96QZ0 392 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 MUC13Q9H3R2 512 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 JMJD4Q9H9V9 463 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 CLK4Q9HAZ1 481 aaKnown RBP12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PLK4O00444 970 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 FOXN1O15353 648 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 VDRP11473 427 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PRG2P13727 222 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 DPYSQ14117 519 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PRR23BQ6ZRT6 265 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 TMEM143Q96AN5 459 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PPP1R14BQ96C90 147 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PGM2Q96G03 612 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 MED8Q96G25 268 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 NAALADL1Q9UQQ1 740 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 ZNF549Q6P9A3 640 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 DPF2Q92785 391 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 POLRMTO00411 1230 aaKnown RBP12.37□□□□□ -0.43
SHANK2-203ENST00000409161 CHRNGP07510 517 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 STOX1Q6ZVD7 989 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 ZHX1-C8orf76Q96EF9 292 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 STX16-NPEPL1H3BU86 382 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 STX16O14662 325 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 RPTNQ6XPR3 784 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 ARCQ7LC44 396 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 PDPRQ8NCN5 879 aa12.37□□□□□ -0.43
SHANK2-203ENST00000409161 MYH14Q7Z406 1995 aaKnown RBP12.37□□□□□ -0.43
SHANK2-203ENST00000409161 NAMPTP43490 491 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 NPY2RP49146 381 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 RAB15P59190 212 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 PLIN5Q00G26 463 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 SMYD1Q8NB12 490 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 C1QTNF7Q9BXJ2 289 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 TRIT1Q9H3H1 467 aaKnown RBP12.36□□□□□ -0.43
SHANK2-203ENST00000409161 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 SNAPC5O75971 98 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 SLC2A4P14672 509 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 LHX1P48742 406 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 CASP5P51878 434 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 RASSF6Q6ZTQ3 369 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 BHLHE22Q8NFJ8 381 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-203ENST00000409161 MCOLN3Q8TDD5 553 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 NACC2Q96BF6 587 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 OXCT2Q9BYC2 517 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-203ENST00000409161 SRP54P61011 504 aaKnown RBP12.36□□□□□ -0.43
SHANK2-203ENST00000409161 PLD1Q13393 1074 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 BTN2A1Q7KYR7 527 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 EMC1Q8N766 993 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 DGCR6LQ9BY27 220 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 MGAT4AQ9UM21 535 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 SSR3Q9UNL2 185 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 ASTN2O75129 1339 aaPredicted RBP12.36□□□□□ -0.43
SHANK2-203ENST00000409161 TMCC2O75069 709 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 COPZ1P61923 177 aa12.36□□□□□ -0.43
SHANK2-203ENST00000409161 ZNF772Q68DY9 489 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms