RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 OR9I1Q8NGQ6 314 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 SKA1Q96BD8 255 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 EBNA1BP2Q99848 306 aaKnown RBP8.52□□□□□ -1.04
SNX13-201ENST00000409076 SAR1AQ9NR31 198 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 STX18Q9P2W9 335 aaKnown RBP8.52□□□□□ -1.04
SNX13-201ENST00000409076 TEX264Q9Y6I9 313 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 MYO7AQ13402 2215 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 UBA6A0AVT1 1052 aaPredicted RBP8.52□□□□□ -1.05
SNX13-201ENST00000409076 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 NDC80O14777 642 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 JUNP05412 331 aaKnown RBP8.52□□□□□ -1.05
SNX13-201ENST00000409076 TFPTP0C1Z6 253 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 VAV1P15498 845 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 MUTP22033 750 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 GPD2P43304 727 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CHRNA4P43681 627 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 ZNF143P52747 638 aaPredicted RBP8.52□□□□□ -1.05
SNX13-201ENST00000409076 USP46P62068 366 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 VGLL4Q14135 290 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CTC1Q2NKJ3 1217 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 PLA2G4EQ3MJ16 856 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 IER5Q5VY09 327 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CWF19L1Q69YN2 538 aaKnown RBP8.52□□□□□ -1.05
SNX13-201ENST00000409076 LPPQ93052 612 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 KCNK16Q96T55 309 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CIB1Q99828 191 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 FTHL17Q9BXU8 183 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 ABCG8Q9H221 673 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 THAP1Q9NVV9 213 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CDH22Q9UJ99 828 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CRYL1Q9Y2S2 319 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 C15orf38-AP3S2A0A0A6YYH1 394 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 SDR42E2A6NKP2 422 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 MAN1A2O60476 641 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 TM7SF2O76062 418 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CLPTM1O96005 669 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 COX4I1P13073 169 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 ARL2P36404 184 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 ALDH1A3P47895 512 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 IDH3AP50213 366 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 EFNA5P52803 228 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 RBP5P82980 135 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 SLC5A9Q2M3M2 681 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 SLC10A6Q3KNW5 377 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 SYPL2Q5VXT5 272 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CLEC6AQ6EIG7 209 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 ARPINQ7Z6K5 226 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 ZNF786Q8N393 782 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 SLCO2A1Q92959 643 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 ATP6V1E2Q96A05 226 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CERS2Q96G23 380 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 VCPIP1Q96JH7 1222 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CCT7Q99832 543 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 TIPINQ9BVW5 301 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 SPATC1LQ9H0A9 340 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 RNF39Q9H2S5 420 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 PCDH10Q9P2E7 1040 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 CPSF3Q9UKF6 684 aaKnown RBP8.52□□□□□ -1.05
SNX13-201ENST00000409076 POMPQ9Y244 141 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 NUP214P35658 2090 aaPredicted RBP8.52□□□□□ -1.05
SNX13-201ENST00000409076 BTAF1O14981 1849 aa8.52□□□□□ -1.05
SNX13-201ENST00000409076 MAST2Q6P0Q8 1798 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 ZBTB14O43829 449 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 CKMT2P17540 419 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 NFKB1P19838 968 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 SKIV2L2P42285 1042 aaKnown RBP8.51□□□□□ -1.05
SNX13-201ENST00000409076 YAP1P46937 504 aaKnown RBP8.51□□□□□ -1.05
SNX13-201ENST00000409076 RAB27AP51159 221 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 THOP1P52888 689 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 HDAC4P56524 1084 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 TRMT5Q32P41 509 aaKnown RBP8.51□□□□□ -1.05
SNX13-201ENST00000409076 ZIK1Q3SY52 487 aaPredicted RBP8.51□□□□□ -1.05
SNX13-201ENST00000409076 LDLRAP1Q5SW96 308 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 SAPCD2Q86UD0 394 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 MIER2Q8N344 545 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 GRIN3AQ8TCU5 1115 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 SEPHS2Q99611 448 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 FSD1LQ9BXM9 530 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 XYLT2Q9H1B5 865 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 CDHR5Q9HBB8 845 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 TRPC7Q9HCX4 862 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 S100A14Q9HCY8 104 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 VCX3AQ9NNX9 186 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 ETAA1Q9NY74 926 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 LRRC42Q9Y546 428 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 KCNU1A8MYU2 1149 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 FAM72CH0Y354 149 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 ALDOAP04075 364 aaKnown RBP8.51□□□□□ -1.05
SNX13-201ENST00000409076 PRKCGP05129 697 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 POLBP06746 335 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 VDRP11473 427 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 ABCE1P61221 599 aaKnown RBP8.51□□□□□ -1.05
SNX13-201ENST00000409076 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 FAM72AQ5TYM5 149 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 FAM72DQ6L9T8 149 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 NAPRTQ6XQN6 538 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 C15orf39Q6ZRI6 1047 aa8.51□□□□□ -1.05
SNX13-201ENST00000409076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.51□□□□□ -1.05
SNX13-201ENST00000409076 FAM72BQ86X60 149 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms