RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ERVW-1Q9UQF0 538 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 MUC22E2RYF6 1773 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 LRRC72A6NJI9 287 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 METTL12A8MUP2 240 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 M0QYT0 321 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 CDX4O14627 284 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 BCAT2O15382 392 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 GRAP2O75791 330 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 SEMA4FO95754 770 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 CER1O95813 267 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 ADH1BP00325 375 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 ERBB2P04626 1255 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 HLA-EP13747 358 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 CDK11BP21127 795 aaKnown RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 STAT1P42224 750 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 GABRB2P47870 512 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 SULT1E1P49888 294 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 SGSHP51688 502 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 PLK1P53350 603 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 KRT83P78385 493 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 APBA1Q02410 837 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 ZNF252P-AS1Q0IIN9 211 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 NME3Q13232 169 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 ZNF177Q13360 481 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 EIF4EBP2Q13542 120 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 ELAVL3Q14576 367 aaKnown RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 KRT31Q15323 416 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 DCAF12L1Q5VU92 463 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 PSAPL1Q6NUJ1 521 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 PPP1R2P3Q6NXS1 205 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 CACUL1Q86Y37 369 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 CFAP52Q8N1V2 620 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 WDTC1Q8N5D0 677 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 MINDY1Q8N5J2 469 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 NEK11Q8NG66 645 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 WFDC5Q8TCV5 224 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 SNX19Q92543 992 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 SKA1Q96BD8 255 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 ERLEC1Q96DZ1 483 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 PRMT1Q99873 361 aaKnown RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 NAA15Q9BXJ9 866 aaKnown RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 MIR1-1HGQ9H1L0 117 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 RSPH9Q9H1X1 276 aaPredicted RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 VPS16Q9H269 839 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 PABPC3Q9H361 631 aaKnown RBP9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 WDCPQ9H6R7 721 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 OSGEPQ9NPF4 335 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 FZD4Q9ULV1 537 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 PI4KAP42356 2102 aa9.37□□□□□ -0.91
SNORD88A-201ENST00000408314 LGALS16A8MUM7 142 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 C1QTNF3-AMACRE9PGA6 284 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 TRIM16O95361 564 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 ZNF883P0CG24 379 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 PDGFRAP16234 1089 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 SOX5P35711 763 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 CXCR3P49682 368 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 AFF3P51826 1226 aaKnown RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 CDH4P55283 916 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 RPS14P62263 151 aaKnown RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 SHC2P98077 582 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 CDR2Q01850 454 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 DEUP1Q05D60 604 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 CCDC15Q0P6D6 951 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 KCNMA1Q12791 1236 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 AUHQ13825 339 aaKnown RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 TAF5Q15542 800 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 INAVAQ3KP66 663 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 ARL13BQ3SXY8 428 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC25A52Q3SY17 297 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 N4BP2L1Q5TBK1 243 aaPredicted RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 TAF3Q5VWG9 929 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 FAM46CQ5VWP2 391 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 FAM124AQ86V42 546 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 XYLT1Q86Y38 959 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 ZCCHC9Q8N567 271 aaKnown RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 DEFB119Q8N690 84 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 ZNF366Q8N895 744 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 LMLNQ96KR4 655 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 NPY6RQ99463 290 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 OMDQ99983 421 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 C2orf49Q9BVC5 232 aaPredicted RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 RETREG1Q9H6L5 497 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 FAM207AQ9NSI2 230 aaPredicted RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 XPO7Q9UIA9 1087 aaKnown RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 VPS28Q9UK41 221 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 AJAP1Q9UKB5 411 aaPredicted RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 VANGL2Q9ULK5 521 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 GON4LQ3T8J9 2241 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 CACNA1EQ15878 2313 aa9.36□□□□□ -0.91
SNORD88A-201ENST00000408314 ANKRD62A6NC57 917 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 ALOX15BO15296 676 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 SIN3BO75182 1162 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 PAGE1O75459 146 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms