RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SPTBN5Q9NRC6 3674 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 MCF2LO15068 1137 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 COILP38432 576 aaPredicted RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 FNTAP49354 379 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 EIF3EP60228 445 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 BYSLQ13895 437 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 CCDC137Q6PK04 289 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 ZC3H18Q86VM9 953 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 TP53INP2Q8IXH6 220 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 MMGT1Q8N4V1 131 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 HJURPQ8NCD3 748 aaPredicted RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 CELF6Q96J87 481 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 OLFM3Q96PB7 478 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 TBC1D14Q9P2M4 693 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 WNT6Q9Y6F9 365 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 A0A1B0GVM2 712 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 TYW5A2RUC4 315 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 GRXCR2A6NFK2 248 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 TCAF2A6NFQ2 919 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 LAMP2P13473 410 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 KCNJ1P48048 391 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 CDH4P55283 916 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 DRICH1Q6PGQ1 229 aaPredicted RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 TPGS1Q6ZTW0 290 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 BPIFB1Q8TDL5 484 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 BHMTQ93088 406 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 NKD2Q969F2 451 aaPredicted RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 TMA16Q96EY4 203 aaKnown RBP21.04■□□□□ 0.96
CHKB-201ENST00000406938 P2RY11Q96G91 374 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 OBP2AQ9NY56 170 aa21.04■□□□□ 0.96
CHKB-201ENST00000406938 HEPACAM2A8MVW5 462 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 TBL1XO60907 577 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 CLDN11O75508 207 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 RBP3P10745 1247 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 MAPKAPK2P49137 400 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 OASLQ15646 514 aaKnown RBP21.03■□□□□ 0.96
CHKB-201ENST00000406938 TEX35Q5T0J7 233 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 CHST9Q7L1S5 443 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 ARHGAP12Q8IWW6 846 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 CCDC105Q8IYK2 499 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 LZTR1Q8N653 840 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 KIAA1958Q8N8K9 716 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 OTUB2Q96DC9 234 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 CCDC114Q96M63 670 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 LINC00597Q9H2U6 94 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 ZFP14Q9HCL3 533 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 DONSONQ9NYP3 566 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 AMACRQ9UHK6 382 aa21.03■□□□□ 0.96
CHKB-201ENST00000406938 DOCK4Q8N1I0 1966 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 DOCK8Q8NF50 2099 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 EFCAB8A8MWE9 144 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 SLC9A3R1O14745 358 aaPredicted RBP21.02■□□□□ 0.96
CHKB-201ENST00000406938 SP100P23497 879 aaPredicted RBP21.02■□□□□ 0.96
CHKB-201ENST00000406938 OR1E1P30953 314 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 SMAD4Q13485 552 aaKnown RBP21.02■□□□□ 0.96
CHKB-201ENST00000406938 MPPE1Q53F39 396 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 AFMIDQ63HM1 303 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 TANGO2Q6ICL3 276 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 C8orf74Q6P047 294 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 B4GALNT4Q76KP1 1039 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 BZW1Q7L1Q6 419 aaKnown RBP21.02■□□□□ 0.96
CHKB-201ENST00000406938 UMODL1-AS1Q8N2C9 162 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 DDI1Q8WTU0 396 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 LRRN4Q8WUT4 740 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 RETREG1Q9H6L5 497 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 NOL6Q9H6R4 1146 aaKnown RBP21.02■□□□□ 0.96
CHKB-201ENST00000406938 C10orf88Q9H8K7 445 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 PCYOX1Q9UHG3 505 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 RAD54BQ9Y620 910 aa21.02■□□□□ 0.96
CHKB-201ENST00000406938 H7C0C1 242 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 ATP5OP48047 213 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 MRPS25P82663 173 aaKnown RBP21.01■□□□□ 0.95
CHKB-201ENST00000406938 GALNT2Q10471 571 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 KCTD19Q17RG1 926 aaPredicted RBP21.01■□□□□ 0.95
CHKB-201ENST00000406938 VITQ6UXI7 678 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 OSCP1Q8WVF1 389 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 HLA-CQ95604 372 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 ASIC4Q96FT7 647 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 QKIQ96PU8 341 aaKnown RBP eCLIP21.01■□□□□ 0.95
CHKB-201ENST00000406938 TMEM121Q9BTD3 319 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 DUS2Q9NX74 493 aaKnown RBP21.01■□□□□ 0.95
CHKB-201ENST00000406938 ZNF148Q9UQR1 794 aa21.01■□□□□ 0.95
CHKB-201ENST00000406938 DFFAO00273 331 aa21■□□□□ 0.95
CHKB-201ENST00000406938 MBTPS2O43462 519 aa21■□□□□ 0.95
CHKB-201ENST00000406938 CYBBP04839 570 aa21■□□□□ 0.95
CHKB-201ENST00000406938 ITGAVP06756 1048 aa21■□□□□ 0.95
CHKB-201ENST00000406938 HOXD9P28356 352 aaPredicted RBP21■□□□□ 0.95
CHKB-201ENST00000406938 NDST2P52849 883 aa21■□□□□ 0.95
CHKB-201ENST00000406938 DR1Q01658 176 aa21■□□□□ 0.95
CHKB-201ENST00000406938 XRCC4Q13426 336 aa21■□□□□ 0.95
CHKB-201ENST00000406938 PDK1Q15118 436 aa21■□□□□ 0.95
CHKB-201ENST00000406938 MPP7Q5T2T1 576 aa21■□□□□ 0.95
CHKB-201ENST00000406938 PARM1Q6UWI2 310 aa21■□□□□ 0.95
CHKB-201ENST00000406938 OTOP3Q7RTS5 596 aa21■□□□□ 0.95
CHKB-201ENST00000406938 E2F7Q96AV8 911 aa21■□□□□ 0.95
CHKB-201ENST00000406938 RUNDC3BQ96NL0 473 aa21■□□□□ 0.95
CHKB-201ENST00000406938 LGMNQ99538 433 aa21■□□□□ 0.95
CHKB-201ENST00000406938 SLC39A8Q9C0K1 460 aa21■□□□□ 0.95
CHKB-201ENST00000406938 SPHK2Q9NRA0 654 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms