RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 THRAP10827 490 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CHRM3P20309 590 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 AKT1P31749 480 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 GRK4P32298 578 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 GPD2P43304 727 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ACTN3Q08043 901 aaPredicted RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PRKAA1Q13131 559 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SMAD1Q15797 465 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 GRAMD1BQ3KR37 738 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ZC3H12AQ5D1E8 599 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 NPNTQ6UXI9 565 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 YTHDF3Q7Z739 585 aaKnown RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM9CQ8IZT9 166 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 LGI2Q8N0V4 545 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CARNMT1Q8N4J0 409 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CSPG4P5Q96PW8 444 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 APOL2Q9BQE5 337 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC4A5Q9BY07 1137 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 YY1AP1Q9H869 796 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 ATP13A1Q9HD20 1204 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PDLIM7Q9NR12 457 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 GID8Q9NWU2 228 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 CD274Q9NZQ7 290 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 VTI1BQ9UEU0 232 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 MARCOQ9UEW3 520 aaPredicted RBP4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 PTPRJQ12913 1337 aa4.85□□□□□ -1.63
PCDH11X-207ENST00000406881 C5orf60A6NFR6 353 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TRIM13O60858 407 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TPBGLP0DKB5 382 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 GOT1P17174 413 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 CALB2P22676 271 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 L1CAMP32004 1257 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 CDH5P33151 784 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 AVPR1AP37288 418 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 KDSRQ06136 332 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 INCA1Q0VD86 236 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 MMRN1Q13201 1228 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SYTL3Q4VX76 610 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 PMF1Q6P1K2 205 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 POTEHQ6S545 545 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 PRPF39Q86UA1 669 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 PLD5Q8N7P1 536 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 DDI1Q8WTU0 396 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 C2orf15Q8WU43 125 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 PBXIP1Q96AQ6 731 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 PGLYRP2Q96PD5 576 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 QKIQ96PU8 341 aaKnown RBP eCLIP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 ASB2Q96Q27 587 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SUDS3Q9H7L9 328 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 LATS2Q9NRM7 1088 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 VPS45Q9NRW7 570 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 GDAP2Q9NXN4 497 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 FETUBQ9UGM5 382 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 GTF2IRD1Q9UHL9 959 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TMEM59LQ9UK28 342 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 ARHGAP26Q9UNA1 814 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 R3HDM2Q9Y2K5 976 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 STARD13Q9Y3M8 1113 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 A0A087X1B8 175 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 A0A096LPK6 155 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TMEM247A6NEH6 219 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 KIF1CO43896 1103 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 XYLBO75191 536 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SNAI1O95863 264 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SHBGP04278 402 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 ETS1P14921 441 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 NQO1P15559 274 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 PSMB4P28070 264 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 CHKAP35790 457 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 BRCC3P46736 316 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SCTRP47872 440 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SERPINH1P50454 418 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 COPAP53621 1224 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 ESRRGP62508 458 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SFSWAPQ12872 951 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 MSLNQ13421 630 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 BMPR2Q13873 1038 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 N4BP2L1Q5TBK1 243 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SEL1L3Q68CR1 1132 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 C15orf39Q6ZRI6 1047 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 LRRC8DQ7L1W4 858 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TMEM110Q86TL2 294 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 DDX53Q86TM3 631 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TDRPQ86YL5 185 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TMEM199Q8N511 208 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 CMASQ8NFW8 434 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 NPLOC4Q8TAT6 608 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 SNX19Q92543 992 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 ZNF75CPQ92670 426 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 PRCCQ92733 491 aaPredicted RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 NTAN1Q96AB6 310 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 TMA16Q96EY4 203 aaKnown RBP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 CERS2Q96G23 380 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 FUBP3Q96I24 572 aaKnown RBP eCLIP4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 CAPNS2Q96L46 248 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 CENPKQ9BS16 269 aa4.84□□□□□ -1.63
PCDH11X-207ENST00000406881 NMRAL1Q9HBL8 299 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms