RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CDH17Q12864 832 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 XRCC4Q13426 336 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 PAGE2BQ5JRK9 111 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 OTUD3Q5T2D3 398 aaPredicted RBP12.28□□□□□ -0.44
SMCR8-201ENST00000406438 MOXD1Q6UVY6 613 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 ZNF34Q8IZ26 560 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 HNRNPLLQ8WVV9 542 aaKnown RBP12.28□□□□□ -0.44
SMCR8-201ENST00000406438 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 CATSPERZQ9NTU4 200 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 SGTAO43765 313 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 VPS72Q15906 364 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 Q4G0T1 1027 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 FBXO33Q7Z6M2 555 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 LRRC34Q8IZ02 419 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 STK40Q8N2I9 435 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 UBASH3BQ8TF42 649 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 ZFRQ96KR1 1074 aaKnown RBP12.28□□□□□ -0.44
SMCR8-201ENST00000406438 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 ZMYM5Q9UJ78 669 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 PLAGL2Q9UPG8 496 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 TSPAN19P0C672 248 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 COPZ1P61923 177 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 TCHHL1Q5QJ38 904 aaPredicted RBP12.28□□□□□ -0.44
SMCR8-201ENST00000406438 GPSM1Q86YR5 675 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 NOA1Q8NC60 698 aaKnown RBP12.28□□□□□ -0.44
SMCR8-201ENST00000406438 PPP1R16AQ96I34 528 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 CDC42EP4Q9H3Q1 356 aaKnown RBP12.28□□□□□ -0.44
SMCR8-201ENST00000406438 ANAPC2Q9UJX6 822 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 LTFP02788 710 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 FAM228BP0C875 321 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 SPIDRQ14159 915 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 ZDHHC13Q8IUH4 622 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 PCDH9Q9HC56 1237 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 MID1IP1Q9NPA3 183 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 LIMD1Q9UGP4 676 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 PSME2Q9UL46 239 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 INVSQ9Y283 1065 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 PCDHB5Q9Y5E4 795 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 N6AMT1Q9Y5N5 214 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 NDUFS2O75306 463 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 TGFBR2P37173 567 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 CASP4P49662 377 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
SMCR8-201ENST00000406438 TUBP50607 506 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 CCNG2Q16589 344 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 FAM171A1Q5VUB5 890 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 RAB23Q9ULC3 237 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 GSTK1Q9Y2Q3 226 aa12.28□□□□□ -0.44
SMCR8-201ENST00000406438 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 MICAL2O94851 1124 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 TYMPP19971 482 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.44
SMCR8-201ENST00000406438 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.44
SMCR8-201ENST00000406438 TCEA2Q15560 299 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 ZNF621Q6ZSS3 439 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 ULK2Q8IYT8 1036 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 TRHDEQ9UKU6 1024 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 ARIH1Q9Y4X5 557 aaPredicted RBP12.27□□□□□ -0.44
SMCR8-201ENST00000406438 KPNA4O00629 521 aaPredicted RBP12.27□□□□□ -0.44
SMCR8-201ENST00000406438 AMHP03971 560 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 PTPN11Q06124 597 aaPredicted RBP12.27□□□□□ -0.44
SMCR8-201ENST00000406438 TXNRD3Q86VQ6 643 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 ZNF671Q8TAW3 534 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 TMCO1Q9UM00 188 aa12.27□□□□□ -0.44
SMCR8-201ENST00000406438 KCNH1O95259 989 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 EPHX2P34913 555 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 MILR1Q7Z6M3 343 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 ATP8B4Q8TF62 1192 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 PDLIM2Q96JY6 352 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 AP3M1Q9Y2T2 418 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 SLC25A12O75746 678 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 NPY2RP49146 381 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 CORO7P57737 925 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 FAM220AQ7Z4H9 259 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 FAM126BQ8IXS8 530 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 ACTRT2Q8TDY3 377 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 SERPINB11Q96P15 392 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 C9orf16Q9BUW7 83 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 COPG2Q9UBF2 871 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 TBKBP1A7MCY6 615 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 CAMTA2O94983 1202 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 TNFAIP8O95379 198 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 POMCP01189 267 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 PRLRP16471 622 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 BCL2L1Q07817 233 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 RETSATQ6NUM9 610 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 MFSD7Q6UXD7 560 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 LRRC74BQ6ZQY2 392 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 COLGALT2Q8IYK4 626 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 CENPIQ92674 756 aaPredicted RBP12.27□□□□□ -0.45
SMCR8-201ENST00000406438 SEMA4DQ92854 862 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 TBL1YQ9BQ87 522 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 RACGAP1Q9H0H5 632 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 PPRC1Q5VV67 1664 aaKnown RBP12.27□□□□□ -0.45
SMCR8-201ENST00000406438 FAM58BPP0C7Q3 252 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 ZNF605Q86T29 641 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 EDEM1Q92611 657 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 OSMRQ99650 979 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms