RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 PSMB4P28070 264 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 EPHX2P34913 555 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 CLCN3P51790 818 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 NME5P56597 212 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 MTX3Q5HYI7 312 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 KRT80Q6KB66 452 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 LPCAT2Q7L5N7 544 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ANKRD23Q86SG2 305 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SULF1Q8IWU6 871 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 C1orf127Q8N9H9 656 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 OR52K1Q8NGK4 314 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 LRTOMTQ8WZ04 291 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 JADE3Q92613 823 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 TMEM176AQ96HP8 235 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 CPB2Q96IY4 423 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 RPL10LQ96L21 214 aaKnown RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SIKE1Q9BRV8 207 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 TMEM79Q9BSE2 394 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 GATA5Q9BWX5 397 aaPredicted RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 MRPL4Q9BYD3 311 aaKnown RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 IL1RL2Q9HB29 575 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SFMBT1Q9UHJ3 866 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 STYXL1Q9Y6J8 313 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 A0A096LPK6 155 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 C7orf72A4D263 438 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 FAM149AA5PLN7 773 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 OGTO15294 1046 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 MSCO60682 206 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 TNFAIP8O95379 198 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 PIGNO95427 931 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 RABGGTBP53611 331 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 ADGRG6Q86SQ4 1221 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 MFSD3Q96ES6 412 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 DHX33Q9H6R0 707 aaKnown RBP9.79□□□□□ -0.84
SMC1B-202ENST00000404354 MINDY3Q9H8M7 445 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 WDR41Q9HAD4 459 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 H0YCG3 227 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 PSMC3P17980 439 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 UGT1A6P19224 532 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 ARL2P36404 184 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 DCTN2Q13561 401 aaKnown RBP9.79□□□□□ -0.84
SMC1B-202ENST00000404354 TAZQ16635 292 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 LY6KQ17RY6 165 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 FAM47CQ5HY64 1035 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 JADE1Q6IE81 842 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 GK5Q6ZS86 529 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 CHST15Q7LFX5 561 aaPredicted RBP9.79□□□□□ -0.84
SMC1B-202ENST00000404354 TSPAN14Q8NG11 270 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 NLRP7Q8WX94 980 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 FAM149B1Q96BN6 582 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 FCRL3Q96P31 734 aaPredicted RBP9.79□□□□□ -0.84
SMC1B-202ENST00000404354 APBA2Q99767 749 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 ACO2Q99798 780 aaKnown RBP9.79□□□□□ -0.84
SMC1B-202ENST00000404354 SLC29A1Q99808 456 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 TRIM8Q9BZR9 551 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 TASP1Q9H6P5 420 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 PNPLA8Q9NP80 782 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 EPS15L1Q9UBC2 864 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 TRIP11Q15643 1979 aa9.79□□□□□ -0.84
SMC1B-202ENST00000404354 LACTBL1A8MY62 500 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 WDR46O15213 610 aaKnown RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 IL1BP01584 269 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 THRAP10827 490 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 TSPAN8P19075 237 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 STAT5BP51692 787 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 LAMTOR4Q0VGL1 99 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ADGRE1Q14246 886 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 GOLGA7BQ2TAP0 167 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 FSCBQ5H9T9 825 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 SH2D4BQ5SQS7 431 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 KLC3Q6P597 504 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 PID1Q7Z2X4 250 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF410Q86VK4 478 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 RNF135Q8IUD6 432 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CCDC185Q8N715 623 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CDH19Q9H159 772 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CXCL16Q9H2A7 254 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ARMC7Q9H6L4 198 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 NOL11Q9H8H0 719 aaKnown RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 MOCS1Q9NZB8 636 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 STK39Q9UEW8 545 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ARHGEF37A1IGU5 675 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 SAC3D1A6NKF1 404 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 KCNU1A8MYU2 1149 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 NRP1O14786 923 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CDH2P19022 906 aaPredicted RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 MX2P20592 715 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ADORA2BP29275 332 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 SERPINB8P50452 374 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 SERPINB9P50453 376 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 NAA20P61599 178 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 TMEM259Q4ZIN3 620 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ARL13AQ5H913 290 aaPredicted RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 PPP1R26Q5T8A7 1209 aaPredicted RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CLVS1Q8IUQ0 354 aaPredicted RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 NLGN1Q8N2Q7 840 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 MARVELD2Q8N4S9 558 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 GPRASP2Q96D09 838 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms