RNA–Protein interactions for RNA: ENST00000403750.5

PPARGC1B-204, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PPARGC1B, Length 3,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-204ENST00000403750 SNX25Q9H3E2 840 aa11.9□□□□□ -0.5
PPARGC1B-204ENST00000403750 TASP1Q9H6P5 420 aa11.9□□□□□ -0.5
PPARGC1B-204ENST00000403750 C20orf96Q9NUD7 363 aaPredicted RBP11.9□□□□□ -0.5
PPARGC1B-204ENST00000403750 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
PPARGC1B-204ENST00000403750 ITGA11Q9UKX5 1188 aa11.9□□□□□ -0.5
PPARGC1B-204ENST00000403750 PCDHGB4Q9UN71 923 aa11.9□□□□□ -0.5
PPARGC1B-204ENST00000403750 PCDHGB5Q9Y5G0 923 aa11.9□□□□□ -0.5
PPARGC1B-204ENST00000403750 hCG_2014768A0A024R1R8 64 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 BIRC5O15392 142 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 BEST1O76090 585 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 KLHL2O95198 593 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 ARSAP15289 507 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 NELFEP18615 380 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 ITGAXP20702 1163 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 EDNRBP24530 442 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 RPS12P25398 132 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 TUBB3Q13509 450 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 IYDQ6PHW0 289 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 PAOXQ6QHF9 649 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 RNF135Q8IUD6 432 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 MCUQ8NE86 351 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 SLC7A14Q8TBB6 771 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 ZSCAN18Q8TBC5 510 aaPredicted RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 TMA16Q96EY4 203 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 CERS2Q96G23 380 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 CNBD2Q96M20 576 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 KLHL4Q9C0H6 718 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 DCDC2Q9UHG0 476 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 MDM4O15151 490 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 COX4I1P13073 169 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 MX2P20592 715 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 CNPY1Q3B7I2 92 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 HFE2Q6ZVN8 426 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 ARCQ7LC44 396 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 SNX32Q86XE0 403 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 LRRC39Q96DD0 335 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 CMTM5Q96DZ9 223 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 QKIQ96PU8 341 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 MPHOSPH6Q99547 160 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 SSX2IPQ9Y2D8 614 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 GAS2O43903 313 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 AOC1P19801 751 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 SEMA5AQ13591 1074 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 GK3PQ14409 553 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 DPYSL2Q16555 572 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 RPS27LQ71UM5 84 aaKnown RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 TMEM110Q86TL2 294 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 GALNT15Q8N3T1 639 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 RNF139Q8WU17 664 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 EDEM1Q92611 657 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 RTP4Q96DX8 246 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 SLC4A5Q9BY07 1137 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 FRMD8Q9BZ67 464 aaPredicted RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 ATXN3LQ9H3M9 355 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 COPS7BQ9H9Q2 264 aaPredicted RBP11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 GJD2Q9UKL4 321 aa11.89□□□□□ -0.51
PPARGC1B-204ENST00000403750 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 EEF2KO00418 725 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 SPTLC1O15269 473 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 SRGAP2BP0DMP2 458 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 VCLP18206 1134 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 PGAM1P18669 254 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 TPSB2P20231 275 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 NAGLUP54802 743 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 MAP3K7CLP57077 242 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 INCA1Q0VD86 236 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 TPSAB1Q15661 275 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 PIGZQ86VD9 579 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 ST13P4Q8IZP2 240 aaPredicted RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 ICA1LQ8NDH6 482 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 PPP2R3CQ969Q6 453 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 APBA2Q99767 749 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 RBPJLQ9UBG7 517 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 TMEM233B4DJY2 109 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 H3BRB1 525 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 PEX1O43933 1283 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 TKTP29401 623 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 ROR2Q01974 943 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 DNAJC1Q96KC8 554 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 GCOM2Q9BZD3 368 aaPredicted RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 PDP2Q9P2J9 529 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 VANGL2Q9ULK5 521 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 ARHGAP26Q9UNA1 814 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 RLFQ13129 1914 aa11.88□□□□□ -0.51
PPARGC1B-204ENST00000403750 LAMA2P24043 3122 aaKnown RBP11.87□□□□□ -0.51
PPARGC1B-204ENST00000403750 BUD23O43709 281 aaKnown RBP11.87□□□□□ -0.51
PPARGC1B-204ENST00000403750 FKBP6O75344 327 aa11.87□□□□□ -0.51
PPARGC1B-204ENST00000403750 PRKCGP05129 697 aa11.87□□□□□ -0.51
PPARGC1B-204ENST00000403750 GSTA2P09210 222 aa11.87□□□□□ -0.51
PPARGC1B-204ENST00000403750 CRABP2P29373 138 aa11.87□□□□□ -0.51
PPARGC1B-204ENST00000403750 SOX11P35716 441 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms