RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 HACE1Q8IYU2 909 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 CENPKQ9BS16 269 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 C11orf84Q9BUA3 381 aaPredicted RBP20.34■□□□□ 0.85
CCDC47-202ENST00000403162 SPATA16Q9BXB7 569 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 PDZD7Q9H5P4 517 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 TUT1Q9H6E5 874 aaKnown RBP20.34■□□□□ 0.85
CCDC47-202ENST00000403162 EIF2B3Q9NR50 452 aaKnown RBP20.34■□□□□ 0.85
CCDC47-202ENST00000403162 PTCH2Q9Y6C5 1203 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 HBP1O60381 514 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 RTN3O95197 1032 aaPredicted RBP20.33■□□□□ 0.85
CCDC47-202ENST00000403162 PHKA2P46019 1235 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 RPL26P61254 145 aaKnown RBP20.33■□□□□ 0.85
CCDC47-202ENST00000403162 DEUP1Q05D60 604 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 POU5F1BQ06416 359 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 FSCN1Q16658 493 aaKnown RBP20.33■□□□□ 0.85
CCDC47-202ENST00000403162 AMHR2Q16671 573 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 LIN52Q52LA3 116 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 PDPK2PQ6A1A2 396 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 C10orf107Q8IVU9 208 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 ST13P4Q8IZP2 240 aaPredicted RBP20.33■□□□□ 0.85
CCDC47-202ENST00000403162 SLAIN1Q8ND83 568 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 SLC35F5Q8WV83 523 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 CENPIQ92674 756 aaPredicted RBP20.33■□□□□ 0.85
CCDC47-202ENST00000403162 EVPLQ92817 2033 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 OLFM3Q96PB7 478 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 KLHL4Q9C0H6 718 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 DHX35Q9H5Z1 703 aaKnown RBP20.33■□□□□ 0.85
CCDC47-202ENST00000403162 PNPOQ9NVS9 261 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 MTMR10Q9NXD2 777 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 ETAA1Q9NY74 926 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 DTLQ9NZJ0 730 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 SLC17A6Q9P2U8 582 aa20.33■□□□□ 0.85
CCDC47-202ENST00000403162 SF3B1O75533 1304 aaKnown RBP eCLIP20.32■□□□□ 0.84
CCDC47-202ENST00000403162 A0A0A0MRY4 1105 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 HACD1B0YJ81 288 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 AP1G2O75843 785 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 DGKIO75912 1065 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 ITGA2BP08514 1039 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 UQCRBP14927 111 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 PGAM1P18669 254 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 PRDX6P30041 224 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 GSTT1P30711 240 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 SNX16P57768 344 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 DYNC1I2Q13409 638 aaKnown RBP20.32■□□□□ 0.84
CCDC47-202ENST00000403162 CASC4Q6P4E1 433 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 ATG14Q6ZNE5 492 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 SCUBE3Q8IX30 993 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 SLC26A7Q8TE54 656 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 HTR3CQ8WXA8 447 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 SPATA13Q96N96 652 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 CSPG4P5Q96PW8 444 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 DMAP1Q9NPF5 467 aaPredicted RBP20.32■□□□□ 0.84
CCDC47-202ENST00000403162 DPP3Q9NY33 737 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 COPG2Q9UBF2 871 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 ADAMTS6Q9UKP5 1117 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 AP4E1Q9UPM8 1137 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 SLC4A7Q9Y6M7 1214 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 PGK1P00558 417 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 INHAP05111 366 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 MYL3P08590 195 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 TFE3P19532 575 aaPredicted RBP20.32■□□□□ 0.84
CCDC47-202ENST00000403162 GRK4P32298 578 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 EPHB1P54762 984 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 ABCE1P61221 599 aaKnown RBP20.32■□□□□ 0.84
CCDC47-202ENST00000403162 MSLNQ13421 630 aaPredicted RBP20.32■□□□□ 0.84
CCDC47-202ENST00000403162 GRM2Q14416 872 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 CNPY1Q3B7I2 92 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 SFT2D3Q587I9 215 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 MAP3K21Q5TCX8 1036 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 NCBP2-AS2Q69YL0 99 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 TFB1MQ8WVM0 346 aaKnown RBP20.32■□□□□ 0.84
CCDC47-202ENST00000403162 ARNTL2Q8WYA1 636 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 NAT9Q9BTE0 207 aa20.32■□□□□ 0.84
CCDC47-202ENST00000403162 KLHL33A6NCF5 533 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 GABBR2O75899 941 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 VAV1P15498 845 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 ARRB2P32121 409 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 MED21Q13503 144 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 IFNLR1Q8IU57 520 aaPredicted RBP20.31■□□□□ 0.84
CCDC47-202ENST00000403162 KCTD15Q96SI1 283 aaPredicted RBP20.31■□□□□ 0.84
CCDC47-202ENST00000403162 SPC25Q9HBM1 224 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 POMPQ9Y244 141 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 CENPFP49454 3210 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 MYADML2A6NDP7 307 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 CASQ2O14958 399 aaPredicted RBP20.31■□□□□ 0.84
CCDC47-202ENST00000403162 PDE5AO76074 875 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 RALBP11234 206 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 ITGAXP20702 1163 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 GJA9P57773 515 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 IGBP1P78318 339 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 GNASQ5JWF2 1037 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 RASIP1Q5U651 963 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 NT5DC4Q86YG4 428 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 GDPD5Q8WTR4 605 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 PSAT1Q9Y617 370 aa20.31■□□□□ 0.84
CCDC47-202ENST00000403162 C22orf31O95567 290 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 INSRRP14616 1297 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 MX2P20592 715 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 CRADDP78560 199 aa20.3■□□□□ 0.84
CCDC47-202ENST00000403162 BIRC2Q13490 618 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms