RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
CEACAM1-206ENST00000403136 NDFIP2Q9NV92 336 aa13.66□□□□□ -0.22
CEACAM1-206ENST00000403136 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
CEACAM1-206ENST00000403136 ALPK3Q96L96 1907 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 LINC01553A4QN01 128 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 F11P03951 625 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 APRTP07741 180 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 PTPN3P26045 913 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 FASTKD3Q14CZ7 662 aaKnown RBP13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 HP1BP3Q5SSJ5 553 aaPredicted RBP13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 SYCP2LQ5T4T6 812 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 AFMIDQ63HM1 303 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 RAP1GAP2Q684P5 730 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 CROCCP2Q86T23 111 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 NLRP14Q86W24 1093 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 CCDC13Q8IYE1 715 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 ZBED8Q8IZ13 594 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 MCUQ8NE86 351 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 DEPDC1BQ8WUY9 529 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 ATP6V1G3Q96LB4 118 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 EMILIN2Q9BXX0 1053 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 ROPN1BQ9BZX4 212 aaPredicted RBP13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 ZYG11BQ9C0D3 744 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 RNF38Q9H0F5 515 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 ROPN1Q9HAT0 212 aaPredicted RBP13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 LRRC4CQ9HCJ2 640 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 RWDD3Q9Y3V2 267 aa13.65□□□□□ -0.22
CEACAM1-206ENST00000403136 GOLGA6L7A0A1B0GV03 622 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 GOLGA6CA6NDK9 693 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 DFFAO00273 331 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 GOLGA6DP0CG33 693 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 TPSB2P20231 275 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 CCNCP24863 283 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 HARS2P49590 506 aaKnown RBP13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 TPSAB1Q15661 275 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 BBS9Q3SYG4 887 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 PABPC1LQ4VXU2 614 aaKnown RBP13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 TEX44Q53QW1 395 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 C6orf118Q5T5N4 469 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 KCTD16Q68DU8 428 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 NADSYN1Q6IA69 706 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 CCDC149Q6ZUS6 474 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 LRRC49Q8IUZ0 686 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 KREMEN2Q8NCW0 462 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 PYROXD1Q8WU10 500 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 DPF3Q92784 378 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 IGSF8Q969P0 613 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 AZIN2Q96A70 460 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 VAT1Q99536 393 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 CEP41Q9BYV8 373 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 CENPHQ9H3R5 247 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 ENTPD7Q9NQZ7 604 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 GKN1Q9NS71 199 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 TMEM248Q9NWD8 314 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 GOLGA6AQ9NYA3 693 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 IGSF9Q9P2J2 1179 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 TRHDEQ9UKU6 1024 aa13.64□□□□□ -0.23
CEACAM1-206ENST00000403136 TLDC2A0PJX2 215 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 C2orf78A6NCI8 922 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 C2orf71A6NGG8 1288 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 HIDE1A8MVS5 230 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 E7EVH7 732 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 ACSL4O60488 711 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 BANF1O75531 89 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 CNTN5O94779 1100 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 OAS1P00973 400 aaKnown RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 ABHD2P08910 425 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 DNAJB1P25685 340 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 NDST2P52849 883 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 GYS2P54840 703 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 ALFQ53S48 1182 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 AGBL2Q5U5Z8 902 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 CAND1Q86VP6 1230 aaKnown RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 CHSY1Q86X52 802 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 ANKMY2Q8IV38 441 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 UMODL1-AS1Q8N2C9 162 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 ZSCAN18Q8TBC5 510 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 PLD4Q96BZ4 506 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 SERPINB12Q96P63 405 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 C17orf80Q9BSJ5 609 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 KLF16Q9BXK1 252 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 IL21Q9HBE4 155 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 KLHL8Q9P2G9 620 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 HMGB1P1B2RPK0 211 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 RASGRF2O14827 1237 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 MAFKO60675 156 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 AVILO75366 819 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 TCEA3O75764 348 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 JCHAINP01591 159 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 LRG1P02750 347 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 C8AP07357 584 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 TACR2P21452 398 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 SLC11A2P49281 568 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 IRAK1P51617 712 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms