RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 BNIPLQ7Z465 357 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 CCAR2Q8N163 923 aaKnown RBP16.37■□□□□ 0.21
ATG4B-203ENST00000400772 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 PCDHB18PQ96TA0 734 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 TBCBQ99426 244 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 GPR174Q9BXC1 333 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 CAPN10Q9HC96 672 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 SLCO3A1Q9UIG8 710 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 TTC34A8MYJ7 566 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 ACADMP11310 421 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 ENGP17813 658 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 CDK11BP21127 795 aaKnown RBP16.36■□□□□ 0.21
ATG4B-203ENST00000400772 MZF1P28698 734 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-203ENST00000400772 STAT1P42224 750 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 NUMBP49757 651 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 SULT1E1P49888 294 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 PLK1P53350 603 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 CENPCQ03188 943 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 UBXN1Q04323 297 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 ARID5BQ14865 1188 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 HNRNPA1L2Q32P51 320 aaKnown RBP16.36■□□□□ 0.21
ATG4B-203ENST00000400772 SLC25A52Q3SY17 297 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 ARTNQ5T4W7 220 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 C9orf64Q5T6V5 341 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 CCDC117Q8IWD4 279 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-203ENST00000400772 ZNF683Q8IZ20 524 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 AOPEPQ8N6M6 819 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 KDM1BQ8NB78 822 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 CADM4Q8NFZ8 388 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 OR52K2Q8NGK3 314 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 CEP76Q8TAP6 659 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 FOXJ1Q92949 421 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 ALG14Q96F25 216 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 RPRD1AQ96P16 312 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-203ENST00000400772 NUP58Q9BVL2 599 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 NUSAP1Q9BXS6 441 aaKnown RBP16.36■□□□□ 0.21
ATG4B-203ENST00000400772 TKTL2Q9H0I9 626 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 WDCPQ9H6R7 721 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 TMEM9BQ9NQ34 198 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 VANGL2Q9ULK5 521 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 STAP1Q9ULZ2 295 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 SLC6A14Q9UN76 642 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 DAAM1Q9Y4D1 1078 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 SNX10Q9Y5X0 201 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 SPTBN2O15020 2390 aa16.36■□□□□ 0.21
ATG4B-203ENST00000400772 A0A1B0GVM2 712 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 TCAF2A6NFQ2 919 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 METTL12A8MUP2 240 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 GOLGA8SH3BPF8 625 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 SIN3BO75182 1162 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 CFIP05156 583 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 SRPRAP08240 638 aaKnown RBP16.35■□□□□ 0.21
ATG4B-203ENST00000400772 SERPINF2P08697 491 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 UNGP13051 313 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-203ENST00000400772 PDGFRAP16234 1089 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 MMP8P22894 467 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 ST8SIA6P61647 398 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 ECT2LQ008S8 904 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 MTA1Q13330 715 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 BRMS1LQ5PSV4 323 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 RABGAP1LQ5R372 815 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 TTC39BQ5VTQ0 682 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-203ENST00000400772 FAM124AQ86V42 546 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 DHX40Q8IX18 779 aaKnown RBP16.35■□□□□ 0.21
ATG4B-203ENST00000400772 ANKRD20A12PQ8NF67 263 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 DNASE2BQ8WZ79 361 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 RPL10LQ96L21 214 aaKnown RBP16.35■□□□□ 0.21
ATG4B-203ENST00000400772 SPAG5Q96R06 1193 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 SIK2Q9H0K1 926 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 RSPH9Q9H1X1 276 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-203ENST00000400772 FBRSQ9HAH7 460 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 TMPRSS4Q9NRS4 437 aa16.35■□□□□ 0.21
ATG4B-203ENST00000400772 CNTN5O94779 1100 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 KCNK5O95279 499 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 MOCS3O95396 460 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 F9P00740 461 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 ADRB1P08588 477 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 ACSL1P33121 698 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 STK19P49842 368 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-203ENST00000400772 ZBTB16Q05516 673 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 DEUP1Q05D60 604 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 PTP4A2Q12974 167 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 SLC12A1Q13621 1099 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 WDR45BQ5MNZ6 344 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 SYCP2LQ5T4T6 812 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 DCAF12L1Q5VU92 463 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 ARCQ7LC44 396 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 PHLDB2Q86SQ0 1253 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 RGL4Q8IZJ4 473 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 MSANTD4Q8NCY6 345 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 NEK11Q8NG66 645 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 SLC30A5Q8TAD4 765 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 PTPRN2Q92932 1015 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 PCMTD1Q96MG8 357 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-203ENST00000400772 CFAP57Q96MR6 1250 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 BPIFA3Q9BQP9 254 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 OR51B4Q9Y5P0 310 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 ITIH6Q6UXX5 1313 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms