RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 TBC1D3CQ6IPX1 549 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 TBC1D3Q8IZP1 549 aaPredicted RBP4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 ARFGAP1Q8N6T3 406 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 ZNF366Q8N895 744 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 OR52N4Q8NGI2 321 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 CCT6BQ92526 530 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 PAPOLBQ9NRJ5 636 aaKnown RBP4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 ZBTB40Q9NUA8 1239 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 DACT1Q9NYF0 836 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 IPO11Q9UI26 975 aaKnown RBP4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 UTS2RQ9UKP6 389 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 NFU1Q9UMS0 254 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 HS3ST3B1Q9Y662 390 aa4.96□□□□□ -1.62
SAMSN1-202ENST00000400564 A0A0G2JK05 382 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 C3orf70A6NLC5 250 aaPredicted RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 SGPL1O95470 568 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 ITGA2BP08514 1039 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 TMEM191BP0C7N4 346 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 TNFRSF1BP20333 461 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 ME1P48163 572 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 LAMB3Q13751 1172 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 PDCD2Q16342 344 aaPredicted RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 ALFQ53S48 1182 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 CCDC70Q6NSX1 233 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 KLHL17Q6TDP4 642 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 KIAA1324Q6UXG2 1013 aaKnown RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 TECPR1Q7Z6L1 1165 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 SLC44A2Q8IWA5 706 aaPredicted RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 IP6K1Q92551 441 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 KAT2AQ92830 837 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 ATP2A3Q93084 1043 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 TRIM63Q969Q1 353 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 MSI2Q96DH6 328 aaKnown RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 TRMOQ9BU70 441 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 TUBB6Q9BUF5 446 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 HTATIP2Q9BUP3 242 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 BRD8Q9H0E9 1235 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 PABPC3Q9H361 631 aaKnown RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 SFXN1Q9H9B4 322 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 ERVK-5Q9HDB9 667 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 PRDM8Q9NQV8 689 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 GRHPRQ9UBQ7 328 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 HERC5Q9UII4 1024 aaKnown RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 FBXO4Q9UKT5 387 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 GTF2A1LQ9UNN4 478 aa4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 COPG1Q9Y678 874 aaKnown RBP4.95□□□□□ -1.62
SAMSN1-202ENST00000400564 CYP3A7-CYP3A51PA0A087WV96 503 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 HEXIM1O94992 359 aaKnown RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 LARGE1O95461 756 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 CSTBP04080 98 aaKnown RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 CYP21A2P08686 494 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 FGF2P09038 288 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 PSG1P11464 419 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 CYP3A7P24462 503 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 AP2B1P63010 937 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 BLMHQ13867 455 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 SMTNL2Q2TAL5 461 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 GALNTL6Q49A17 601 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 CCDC38Q502W7 563 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 ARL13AQ5H913 290 aaPredicted RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 ATPAF1Q5TC12 328 aaPredicted RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 NFRKBQ6P4R8 1299 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 CCDC174Q6PII3 467 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 RTL10Q7L3V2 364 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 RRAGAQ7L523 313 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 MDGA2Q7Z553 956 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 CACNA2D3Q8IZS8 1091 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 PAQR4Q8N4S7 273 aaPredicted RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 ADPRHL1Q8NDY3 354 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 STT3BQ8TCJ2 826 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 RSC1A1Q92681 617 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 VCPIP1Q96JH7 1222 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 ADAD1Q96M93 576 aaKnown RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 ELAC1Q9H777 363 aaKnown RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 SEMA4BQ9NPR2 832 aaPredicted RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 THSD1Q9NS62 852 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 LIN7CQ9NUP9 197 aaKnown RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 AGO2Q9UKV8 859 aaKnown RBP4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 SLC8A2Q9UPR5 921 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 PCDHA10Q9Y5I2 948 aa4.94□□□□□ -1.62
SAMSN1-202ENST00000400564 KIR2DS5A0A0G2JLQ3 304 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 hCG_1642624A0A1W2PR95 340 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 CXorf65A6NEN9 183 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 A6NNC1 897 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 KIR2DS3K7RE56 304 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 NDUFB8O95169 186 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 CIITAP33076 1130 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 CHKAP35790 457 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 CCT4P50991 539 aaKnown RBP4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 RCAN1P53805 252 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 ODF3L2Q3SX64 289 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 LEXMQ3ZCV2 418 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 TTC22Q5TAA0 569 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 TMEM88Q6PEY1 159 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 CLEC4GQ6UXB4 293 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 COLCA1Q6ZS62 124 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 B4GALNT4Q76KP1 1039 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 RAB11FIP2Q7L804 512 aa4.93□□□□□ -1.62
SAMSN1-202ENST00000400564 CCDC117Q8IWD4 279 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms