RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TRMT13Q9NUP7 481 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PCDHGB1Q9Y5G3 927 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CCDC61Q9Y6R9 512 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ARMC8Q8IUR7 673 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ZZZ3Q8IYH5 903 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM120BQ96EK7 910 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF560Q96MR9 790 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 NECAB3Q96P71 396 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 NCKIPSDQ9NZQ3 722 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CRLS1Q9UJA2 301 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 GNEQ9Y223 722 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 FGAP02671 866 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CD58P19256 250 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 RBL2Q08999 1139 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 UNC13DQ70J99 1090 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 GALNTL5Q7Z4T8 443 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PDPRQ8NCN5 879 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF473Q8WTR7 871 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 CDADC1Q9BWV3 514 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TMEM121BQ9BXQ6 578 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 MAU2Q9Y6X3 613 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 H3BNX3 289 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 GIMD1P0DJR0 217 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC20A2Q08357 652 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 GINS1Q14691 196 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TOMM20Q15388 145 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 DLG2Q15700 870 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 MRNIPQ6NTE8 343 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PNMA1Q8ND90 353 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 BAP1Q92560 729 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 KAT2BQ92831 832 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF184Q99676 751 aaPredicted RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 HEPHQ9BQS7 1158 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TMEM184CQ9NVA4 438 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PTGFRNQ9P2B2 879 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 MRTO4Q9UKD2 239 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 SQORQ9Y6N5 450 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 ANKRD33BA6NCL7 494 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 BMP7P18075 431 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 RORAP35398 523 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 PCK2Q16822 640 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 IQSEC1Q6DN90 963 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 MED23Q9ULK4 1368 aa8.74□□□□□ -1.01
CACNA1C-220ENST00000399655 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CHN1P15882 459 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 C1QBPQ07021 282 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 STILQ15468 1287 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 DPY30Q9C005 99 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ZCCHC2Q9C0B9 1178 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CNOT8Q9UFF9 292 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ATE1O95260 518 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 IFNAR1P17181 557 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM47AQ5JRC9 791 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 LCN1P1Q5VSP4 162 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ATXN7L3BQ96GX2 97 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ZSWIM5Q9P217 1185 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 DNAJB4Q9UDY4 337 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PADI2Q9Y2J8 665 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MROH5Q6ZUA9 1318 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM135BQ49AJ0 1406 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 IFNA21P01568 189 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 JAK3P52333 1124 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FGD3Q5JSP0 725 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 BRMS1LQ5PSV4 323 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 DENND1BQ6P3S1 775 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 SYCE2Q6PIF2 218 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MIER2Q8N344 545 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MCPH1Q8NEM0 835 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ETNPPLQ8TBG4 499 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 C11orf24Q96F05 449 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 DCTPP1Q9H773 170 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CATSPERZQ9NTU4 200 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 GJA3Q9Y6H8 435 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM170AA1A519 330 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CLPXO76031 633 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PEX6Q13608 980 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 DCST2Q5T1A1 773 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ASPNQ9BXN1 380 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 EPB41L1Q9H4G0 881 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MRPS7Q9Y2R9 242 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ANXA9O76027 345 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CD79BP40259 229 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MAD2L1BPQ15013 274 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PDIA6Q15084 440 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 BEND4Q6ZU67 534 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 OR2L2Q8NH16 312 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 TIMM8BQ9Y5J9 83 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ARHGEF17Q96PE2 2063 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 SERPINE1P05121 402 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 RBP1P09455 135 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CCR4P51679 360 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 LARS2Q15031 903 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 RNF44Q7L0R7 432 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ARCQ7LC44 396 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 DCUN1D5Q9BTE7 237 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 SPON2Q9BUD6 331 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 TMEM120BA0PK00 339 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms