RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 PREX2Q70Z35 1606 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 UBE2QL1A1L167 161 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 SERPINE1P05121 402 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 OR1E1P30953 314 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 PIK3CGP48736 1102 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CACNA2D1P54289 1103 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 EPS8Q12929 822 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CAMK1Q14012 370 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 SETMARQ53H47 684 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CLVS1Q8IUQ0 354 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 MYCBPAPQ8TBZ2 947 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ATAD3AQ9NVI7 634 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 FOXN3O00409 490 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ZBTB14O43829 449 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 KPNA6O60684 536 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 RAMP2O60895 175 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 XRCC4Q13426 336 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 BMPR2Q13873 1038 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ZFP1Q6P2D0 407 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 NOA1Q8NC60 698 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 SEMA4DQ92854 862 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ASB2Q96Q27 587 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CLCC1Q96S66 551 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 PRKD2Q9BZL6 878 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 RHBGQ9H310 441 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 EHD3Q9NZN3 535 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 EIF3MQ7L2H7 374 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ACTRT1Q8TDG2 376 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ANKRD27Q96NW4 1050 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 BTBD10Q9BSF8 475 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 REEP1Q9H902 201 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 PHF11Q9UIL8 331 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 TFR2Q9UP52 801 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 CCNG2Q16589 344 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 RETSATQ6NUM9 610 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 DSELQ8IZU8 1212 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 BTBD9Q96Q07 612 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 TMEM216Q9P0N5 145 aa12.54□□□□□ -0.4
CACNA1C-219ENST00000399649 ZNF609O15014 1411 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 MT-CO1P00395 513 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 PRG2P13727 222 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 CTSEP14091 401 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 S100A3P33764 101 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 STK32CQ86UX6 486 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 FAM126BQ8IXS8 530 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 HGH1Q9BTY7 390 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ANKDD1BA6NHY2 528 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 MRASO14807 208 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 IDH3BO43837 385 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 CLCN3P51790 818 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ARF5P84085 180 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TCEA2Q15560 299 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 CELF6Q96J87 481 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 SLC35C2Q9NQQ7 365 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 SOHLH2Q9NX45 425 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 UXTQ9UBK9 157 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 PTGES3LE9PB15 166 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 NEK3P51956 506 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ELAVL2Q12926 359 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TIMM50Q3ZCQ8 353 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 INO80DQ53TQ3 878 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TMPRSS6Q8IU80 811 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ZNF276Q8N554 614 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ATP13A1Q9HD20 1204 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 RRN3Q9NYV6 651 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 SLC25A12O75746 678 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TLX1P31314 330 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 CASP4P49662 377 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TRPV3Q8NET8 790 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TMCO1Q9UM00 188 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 BTN3A1O00481 513 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ATP5BP06576 529 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 MTAPQ13126 283 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TFAP2DQ7Z6R9 452 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 TAF8Q7Z7C8 310 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 PDLIM2Q96JY6 352 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 ELL3Q9HB65 397 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 STARD7Q9NQZ5 370 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
CACNA1C-219ENST00000399649 SSNA1O43805 119 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 NDUFS2O75306 463 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 PROSCO94903 275 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 RTN3O95197 1032 aaPredicted RBP12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 FMO4P31512 558 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 CRATP43155 626 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 MYBPC2Q14324 1141 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 FAM171BQ6P995 826 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 IL27RAQ6UWB1 636 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 TMC7Q7Z402 723 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms