RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EGFP01133 1207 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CHRNB1P11230 501 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 GOT1P17174 413 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DGKGP49619 791 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CDH4P55283 916 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LMAN2Q12907 356 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MMRN1Q13201 1228 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CCINQ13939 588 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DPYSQ14117 519 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FUT11Q495W5 492 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 LRRC38Q5VT99 294 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TTC39BQ5VTQ0 682 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CHST9Q7L1S5 443 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 POLNQ7Z5Q5 900 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TFAP2DQ7Z6R9 452 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DAAM2Q86T65 1068 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NT5DC3Q86UY8 548 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TXLNBQ8N3L3 684 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 CARNMT1Q8N4J0 409 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RNF10Q8N5U6 811 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TERB1Q8NA31 727 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 FIBINQ8TAL6 211 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RAPGEF5Q92565 580 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ALG14Q96F25 216 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 XPO6Q96QU8 1125 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 SLC2A11Q9BYW1 496 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TSGA10Q9BZW7 698 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 KLC2Q9H0B6 622 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ARHGEF4Q9NR80 690 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 RBM12Q9NTZ6 932 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 ABCB8Q9NUT2 735 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 DEC1Q9P2X7 70 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 NDRG2Q9UN36 371 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 TBC1D30Q9Y2I9 924 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 OR51B4Q9Y5P0 310 aa12.78□□□□□ -0.36
HLA-DQB1-203ENST00000399082 WASH4PA8MWX3 477 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MAN2B1O00754 1011 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KRT86O43790 486 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SPOPO43791 374 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CLDN11O75508 207 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KAT7O95251 611 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FTCDO95954 541 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RHOQP17081 205 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MZF1P28698 734 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EPHB2P29323 1055 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DPYSL3Q14195 570 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 HADHQ16836 314 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 LRRC31Q6UY01 552 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RFX8Q6ZV50 586 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ADIPOR2Q86V24 386 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CCDC105Q8IYK2 499 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PJA1Q8NG27 643 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CSPG4P5Q96PW8 444 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PNKPQ96T60 521 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EPAS1Q99814 870 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ETNK2Q9NVF9 386 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TMEM248Q9NWD8 314 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DLGAP2Q9P1A6 1054 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GGA2Q9UJY4 613 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MFHAS1Q9Y4C4 1052 aa12.77□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ATG2BQ96BY7 2078 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TYW5A2RUC4 315 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FAM86C2PA6NEL3 165 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 H0Y626 953 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DCLK1O15075 740 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PI15O43692 258 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KRT7P08729 469 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PABPC1P11940 636 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TNNT1P13805 278 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ERCC2P18074 760 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KDELR1P24390 212 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CTNNA2P26232 953 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 HTR7P34969 479 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CSKP41240 450 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GRIA2P42262 883 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KIR2DL1P43626 348 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 HCAR3P49019 387 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NUMBP49757 651 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PEX5P50542 639 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NAP1L1P55209 391 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CDH6P55285 790 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TPI1P60174 286 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 AMPD2Q01433 879 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CDH18Q13634 790 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GAS6Q14393 721 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 UBXN2BQ14CS0 331 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
HLA-DQB1-203ENST00000399082 Q6ZS52 159 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms